Literature DB >> 9510509

Comparative mapping of X chromosomes in vole species of the genus Microtus.

T B Nesterova1, S M Duthie, N A Mazurok, A A Isaenko, N V Rubtsova, S M Zakian, N Brockdorff.   

Abstract

Comparative mapping of X-linked genes has progressed rapidly since Ohno's prediction that genes on the X chromosome should be conserved as a syntenic group in all mammals. Although several conserved blocks of homology between human and mouse have been discovered, rearrangements within the X chromosome have also been characterized. More recently, some exceptions to Ohno's law have been reported. We have used fluorescence in situ hybridization (FISH) to map five genes, Gla, G6pd, Hprt, Pgk1 and Xist, to two of the largest conserved segments of X material in five members of the genus Microtus (grey vole) and show that vole X chromosomes demonstrate greater homology to human than to mouse. Cytogenetic analysis indicates a relatively high frequency of rearrangement during vole evolution, although certain blocks of homology appear to be highly conserved in all species studied to date. On this basis we were able to predict the probable location of the rat X inactivation centre (Xic) based solely on high-resolution G-banding. Our prediction was then confirmed by mapping the rat Xist gene by FISH. The possible significance of conserving long-range chromosome structure in the vicinity of the Xic is discussed with respect to the mechanism of X inactivation.

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Year:  1998        PMID: 9510509     DOI: 10.1023/a:1009266324602

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  24 in total

1.  The product of the mouse Xist gene is a 15 kb inactive X-specific transcript containing no conserved ORF and located in the nucleus.

Authors:  N Brockdorff; A Ashworth; G F Kay; V M McCabe; D P Norris; P J Cooper; S Swift; S Rastan
Journal:  Cell       Date:  1992-10-30       Impact factor: 41.582

2.  Gene mapping in marsupials and monotremes. II. Assignments to the X chromosome of dasyurid marsupials.

Authors:  A Dobrovic; J A Marshall Graves
Journal:  Cytogenet Cell Genet       Date:  1986

3.  X-Inactivation and histone H4 acetylation in embryonic stem cells.

Authors:  A M Keohane; L P O'neill; N D Belyaev; J S Lavender; B M Turner
Journal:  Dev Biol       Date:  1996-12-15       Impact factor: 3.582

4.  A gene-based genetic linkage and comparative map of the rat X chromosome.

Authors:  I Y Millwood; M T Bihoreau; D Gauguier; G Hyne; E R Levy; R Kreutz; G M Lathrop; A P Monaco
Journal:  Genomics       Date:  1997-03-01       Impact factor: 5.736

5.  New insights into the man-mouse comparative map of the X chromosome.

Authors:  H J Blair; V Reed; S H Laval; Y Boyd
Journal:  Genomics       Date:  1994-01-15       Impact factor: 5.736

6.  Extension of the physical map in the region of the mouse X chromosome homologous to human Xq28 and identification of an exception to conserved linkage.

Authors:  C J Faust; B Levinson; J Gitschier; G E Herman
Journal:  Genomics       Date:  1992-08       Impact factor: 5.736

7.  Sex chromosome evolution: platypus gene mapping suggests that part of the human X chromosome was originally autosomal.

Authors:  J M Watson; J A Spencer; A D Riggs; J A Graves
Journal:  Proc Natl Acad Sci U S A       Date:  1991-12-15       Impact factor: 11.205

8.  Demonstration of the X-linkage and order to the genes GLA, G6PD, HPRT, and PGK in two vole species of the genus Microtus.

Authors:  T B Nesterova; N A Mazurok; N M Matveeva; A G Shilov; E I Yantsen; E K Ginsburg; S J Goss; S M Zakian
Journal:  Cytogenet Cell Genet       Date:  1994

9.  The murine interleukin-3 receptor alpha subunit gene: chromosomal localization, genomic structure, and promoter function.

Authors:  I Miyajima; L Levitt; T Hara; M A Bedell; N G Copeland; N A Jenkins; A Miyajima
Journal:  Blood       Date:  1995-03-01       Impact factor: 22.113

10.  Different chromosomal localization of the Clcn4 gene in Mus spretus and C57BL/6J mice.

Authors:  E I Rugarli; D A Adler; G Borsani; K Tsuchiya; B Franco; X Hauge; C Disteche; V Chapman; A Ballabio
Journal:  Nat Genet       Date:  1995-08       Impact factor: 38.330

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  12 in total

1.  X chromosome painting in Microtus: origin and evolution of the giant sex chromosomes.

Authors:  J A Marchal; M J Acosta; H Nietzel; K Sperling; M Bullejos; R Díaz de la Guardia; A Sánchez
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

2.  Comparative chromosome and mitochondrial DNA analyses and phylogenetic relationships within common voles (Microtus, Arvicolidae).

Authors:  N A Mazurok; N V Rubtsova; A A Isaenko; M E Pavlova; S Y Slobodyanyuk; T B Nesterova; S M Zakian
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

3.  Difference between random and imprinted X inactivation in common voles.

Authors:  Elena V Dementyeva; Alexander I Shevchenko; Olga V Anopriyenko; Nina A Mazurok; Eugeny A Elisaphenko; Tatyana B Nesterova; Neil Brockdorff; Suren M Zakian
Journal:  Chromosoma       Date:  2010-05-15       Impact factor: 4.316

4.  Fourfold faster rate of genome rearrangement in nematodes than in Drosophila.

Authors:  Avril Coghlan; Kenneth H Wolfe
Journal:  Genome Res       Date:  2002-06       Impact factor: 9.043

5.  Attenuated spread of X-inactivation in an X;autosome translocation.

Authors:  Bilyana C Popova; Takashi Tada; Nobuo Takagi; Neil Brockdorff; Tatyana B Nesterova
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-05       Impact factor: 11.205

6.  Characterization of the genomic Xist locus in rodents reveals conservation of overall gene structure and tandem repeats but rapid evolution of unique sequence.

Authors:  T B Nesterova; S Y Slobodyanyuk; E A Elisaphenko; A I Shevchenko; C Johnston; M E Pavlova; I B Rogozin; N N Kolesnikov; N Brockdorff; S M Zakian
Journal:  Genome Res       Date:  2001-05       Impact factor: 9.043

7.  Centromere repositioning in the X chromosome of XO/XO mammals, Ryukyu spiny rat.

Authors:  Tsuyoshi Kobayashi; Fumio Yamada; Takuma Hashimoto; Shintaro Abe; Yoichi Matsuda; Asato Kuroiwa
Journal:  Chromosome Res       Date:  2008-04-24       Impact factor: 5.239

8.  Impact of Xist RNA on chromatin modifications and transcriptional silencing maintenance at different stages of imprinted X chromosome inactivation in vole Microtus levis.

Authors:  Alexander I Shevchenko; Elena V Grigor'eva; Sergey P Medvedev; Irina S Zakharova; Elena V Dementyeva; Eugeny A Elisaphenko; Anastasia A Malakhova; Sophia V Pavlova; Suren M Zakian
Journal:  Chromosoma       Date:  2017-11-18       Impact factor: 4.316

9.  Variability of sequence surrounding the Xist gene in rodents suggests taxon-specific regulation of X chromosome inactivation.

Authors:  Alexander I Shevchenko; Anastasia A Malakhova; Eugeny A Elisaphenko; Nina A Mazurok; Tatyana B Nesterova; Neil Brockdorff; Suren M Zakian
Journal:  PLoS One       Date:  2011-08-03       Impact factor: 3.240

10.  FGF4 independent derivation of trophoblast stem cells from the common vole.

Authors:  Elena V Grigor'eva; Alexander I Shevchenko; Nina A Mazurok; Eugeny A Elisaphenko; Antonina I Zhelezova; Alexander G Shilov; Pavel A Dyban; Andrey P Dyban; Ekaterina M Noniashvili; Sergey Ya Slobodyanyuk; Tatyana B Nesterova; Neil Brockdorff; Suren M Zakian
Journal:  PLoS One       Date:  2009-09-24       Impact factor: 3.240

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