Literature DB >> 9504936

Fine-scale spatial genetic structure with nonuniform distribution of individuals.

A Doligez1, C Baril, H I Joly.   

Abstract

This paper presents the first theoretical study of spatial genetic structure within nonuniformly distributed continuous plant populations. A novel individual-based model of isolation by distance was constructed to simulate genetic evolution within such populations. We found larger values of spatial genetic autocorrelations in highly clumped populations than in uniformly distributed populations. Most of this difference was caused by differences in mean dispersal distances, but aggregation probably also produced a slight increase in spatial genetic structure. Using an appropriate level of approximation of the continuous distribution of individuals in space, we assessed the potential effects of density, seed and pollen dispersal, generation overlapping, and overdominance selection at an independent locus, on fine-scale genetic structure, by varying them separately in a few particular cases with extreme clumping. When selfing was allowed, all these input variables influenced both aggregation and spatial genetic structure. Most variations in spatial genetic structure were closely linked to variations in clumping and/or local density. When selfing was not allowed, spatial genetic structure was lower in most cases.

Mesh:

Year:  1998        PMID: 9504936      PMCID: PMC1459809     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  9 in total

1.  Homozygosity and patch structure in plant populations as a result of nearest-neighbor pollination.

Authors:  M E Turner; J C Stephens; W W Anderson
Journal:  Proc Natl Acad Sci U S A       Date:  1982-01       Impact factor: 11.205

2.  A Test of Spatial Autocorrelation Analysis Using an Isolation-by-Distance Model.

Authors:  R R Sokal; D E Wartenberg
Journal:  Genetics       Date:  1983-09       Impact factor: 4.562

3.  Isolation by Distance.

Authors:  S Wright
Journal:  Genetics       Date:  1943-03       Impact factor: 4.562

4.  Tree dispersion, abundance, and diversity in a tropical dry forest.

Authors:  S P Hubbell
Journal:  Science       Date:  1979-03-30       Impact factor: 47.728

5.  Measurement of genetic structure within populations using Moran's spatial autocorrelation statistics.

Authors:  B K Epperson; T Li
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-17       Impact factor: 11.205

6.  Spatial autocorrelation of genotypes under directional selection.

Authors:  B K Epperson
Journal:  Genetics       Date:  1990-03       Impact factor: 4.562

7.  Spatial autocorrelation analysis of migration and selection.

Authors:  R R Sokal; G M Jacquez; M C Wooten
Journal:  Genetics       Date:  1989-04       Impact factor: 4.562

8.  Autocorrelation of gene frequencies under isolation by distance.

Authors:  G Barbujani
Journal:  Genetics       Date:  1987-12       Impact factor: 4.562

9.  Spatial distributions of genotypes under isolation by distance.

Authors:  B K Epperson
Journal:  Genetics       Date:  1995-08       Impact factor: 4.562

  9 in total
  12 in total

1.  Impacts of seed and pollen flow on population genetic structure for plant genomes with three contrasting modes of inheritance.

Authors:  X S Hu; R A Ennos
Journal:  Genetics       Date:  1999-05       Impact factor: 4.562

2.  Individual spatial aggregation correlates with between-population variation in fine-scale genetic structure of Silene ciliata (Caryophyllaceae).

Authors:  C Lara-Romero; A García-Fernández; J J Robledo-Arnuncio; M Roumet; J Morente-López; A López-Gil; J M Iriondo
Journal:  Heredity (Edinb)       Date:  2015-11-25       Impact factor: 3.821

3.  Isolation-by-distance in landscapes: considerations for landscape genetics.

Authors:  M J van Strien; R Holderegger; H J Van Heck
Journal:  Heredity (Edinb)       Date:  2014-07-23       Impact factor: 3.821

4.  Pollen-mediated gene flow and fine-scale spatial genetic structure in Olea europaea subsp. europaea var. sylvestris.

Authors:  D Beghè; A Piotti; Z Satovic; R de la Rosa; A Belaj
Journal:  Ann Bot       Date:  2017-03-01       Impact factor: 4.357

5.  Local-scale patterns of genetic variability, outcrossing, and spatial structure in natural stands of Arabidopsis thaliana.

Authors:  Kirsten Bomblies; Levi Yant; Roosa A Laitinen; Sang-Tae Kim; Jesse D Hollister; Norman Warthmann; Joffrey Fitz; Detlef Weigel
Journal:  PLoS Genet       Date:  2010-03-26       Impact factor: 5.917

Review 6.  Ecogeographic genetic epidemiology.

Authors:  Chantel D Sloan; Eric J Duell; Xun Shi; Rebecca Irwin; Angeline S Andrew; Scott M Williams; Jason H Moore
Journal:  Genet Epidemiol       Date:  2009-05       Impact factor: 2.135

7.  Population processes at multiple spatial scales maintain diversity and adaptation in the Linum marginale--Melampsora lini association.

Authors:  Adnane Nemri; Luke G Barrett; Anna-Liisa Laine; Jeremy J Burdon; Peter H Thrall
Journal:  PLoS One       Date:  2012-07-31       Impact factor: 3.240

8.  The limits of mean-field heterozygosity estimates under spatial extension in simulated plant populations.

Authors:  James L Kitchen; Robin G Allaby
Journal:  PLoS One       Date:  2012-08-27       Impact factor: 3.240

Review 9.  Systems Modeling at Multiple Levels of Regulation: Linking Systems and Genetic Networks to Spatially Explicit Plant Populations.

Authors:  James L Kitchen; Robin G Allaby
Journal:  Plants (Basel)       Date:  2013-01-25

10.  Detection of Self Incompatibility Genotypes in Prunus africana: Characterization, Evolution and Spatial Analysis.

Authors:  Judith Ssali Nantongo; Gerald Eilu; Thomas Geburek; Silvio Schueler; Heino Konrad
Journal:  PLoS One       Date:  2016-06-27       Impact factor: 3.240

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