Literature DB >> 2721935

Spatial autocorrelation analysis of migration and selection.

R R Sokal1, G M Jacquez, M C Wooten.   

Abstract

We test various assumptions necessary for the interpretation of spatial autocorrelation analysis of gene frequency surfaces, using simulations of Wright's isolation-by-distance model with migration or selection superimposed. Increasing neighborhood size enhances spatial autocorrelation, which is reduced again for the largest neighborhood sizes. Spatial correlograms are independent of the mean gene frequency of the surface. Migration affects surfaces and correlograms when immigrant gene frequency differentials are substantial. Multiple directions of migration are reflected in the correlograms. Selection gradients yield clinal correlograms; other selection patterns are less clearly reflected in their correlograms. Sequential migration from different directions and at different gene frequencies can be disaggregated into component migration vectors by means of principal components analysis. This encourages analysis by such methods of gene frequency surfaces in nature. The empirical results of these findings lend support to the inference structure developed earlier for spatial autocorrelation analysis.

Mesh:

Year:  1989        PMID: 2721935      PMCID: PMC1203668     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  4 in total

1.  A Test of Spatial Autocorrelation Analysis Using an Isolation-by-Distance Model.

Authors:  R R Sokal; D E Wartenberg
Journal:  Genetics       Date:  1983-09       Impact factor: 4.562

2.  The genetic structure of a tribal population, the Yanomama Indians. XV. Patterns inferred by autocorrelation analysis.

Authors:  R R Sokal; P E Smouse; J V Neel
Journal:  Genetics       Date:  1986-09       Impact factor: 4.562

3.  Synthetic maps of human gene frequencies in Europeans.

Authors:  P Menozzi; A Piazza; L Cavalli-Sforza
Journal:  Science       Date:  1978-09-01       Impact factor: 47.728

4.  The detection of disease clustering and a generalized regression approach.

Authors:  N Mantel
Journal:  Cancer Res       Date:  1967-02       Impact factor: 12.701

  4 in total
  13 in total

1.  Effect of balancing selection on spatial genetic structure within populations: theoretical investigations on the self-incompatibility locus and empirical studies in Arabidopsis halleri.

Authors:  J-B Leducq; V Llaurens; V Castric; P Saumitou-Laprade; O J Hardy; X Vekemans
Journal:  Heredity (Edinb)       Date:  2010-06-09       Impact factor: 3.821

2.  Isozyme variation and species relationships in the genus Lolium L. (ryegrasses, Graminaceae).

Authors:  G Charmet; F Balfourier
Journal:  Theor Appl Genet       Date:  1994-01       Impact factor: 5.699

3.  Geostatistics for spatial genetic structures: study of wild populations of perennial ryegrass.

Authors:  P Monestiez; M Goulard; G Charmet
Journal:  Theor Appl Genet       Date:  1994-04       Impact factor: 5.699

4.  Zones of sharp genetic change in Europe are also linguistic boundaries.

Authors:  G Barbujani; R R Sokal
Journal:  Proc Natl Acad Sci U S A       Date:  1990-03       Impact factor: 11.205

5.  Space versus phylogeny: disentangling phylogenetic and spatial signals in comparative data.

Authors:  Robert P Freckleton; Walter Jetz
Journal:  Proc Biol Sci       Date:  2009-01-07       Impact factor: 5.349

6.  Fine-scale spatial genetic structure with nonuniform distribution of individuals.

Authors:  A Doligez; C Baril; H I Joly
Journal:  Genetics       Date:  1998-02       Impact factor: 4.562

7.  Measurement of genetic structure within populations using Moran's spatial autocorrelation statistics.

Authors:  B K Epperson; T Li
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-17       Impact factor: 11.205

8.  Spatial autocorrelation of genotypes under directional selection.

Authors:  B K Epperson
Journal:  Genetics       Date:  1990-03       Impact factor: 4.562

9.  Spatial structure of two-locus genotypes under isolation by distance.

Authors:  B K Epperson
Journal:  Genetics       Date:  1995-05       Impact factor: 4.562

10.  Adaptation and diversity along an altitudinal gradient in Ethiopian barley (Hordeum vulgare L.) landraces revealed by molecular analysis.

Authors:  Tesema Tanto Hadado; Domenico Rau; Elena Bitocchi; Roberto Papa
Journal:  BMC Plant Biol       Date:  2010-06-21       Impact factor: 4.215

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