Literature DB >> 9504910

The RAD52 recombinational repair pathway is essential in pol30 (PCNA) mutants that accumulate small single-stranded DNA fragments during DNA synthesis.

B J Merrill1, C Holm.   

Abstract

To identify in vivo pathways that compensate for impaired proliferating cell nuclear antigen (PCNA or Pol30p in yeast) activity, we performed a synthetic lethal screen with the yeast pol30-104 mutation. We identified nine mutations that display synthetic lethality with pol30-104; three mutations affected the structural gene for the large subunit of replication factor C (rfc1), which loads PCNA onto DNA, and six mutations affected three members of the RAD52 epistasis group for DNA recombinational repair (rad50, rad52 and rad57). We also found that pol30-104 displayed synthetic lethality with mutations in other members of the RAD52 epistasis group (rad51 and rad54), but not with mutations in members of the RAD3 nor the RAD6 epistasis group. Analysis of nine different pol30 mutations shows that the requirement for the RAD52 pathway is correlated with a DNA replication defect but not with the relative DNA repair defect caused by pol30 mutations. In addition, mutants that require RAD52 for viability (pol30-100, pol30-104, rfc1-1 and rth1delta) accumulate small single-stranded DNA fragments during DNA replication in vivo. Taken together, these data suggest that the RAD52 pathway is required when there are defects in the maturation of Okazaki fragments.

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Year:  1998        PMID: 9504910      PMCID: PMC1459832     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  46 in total

1.  Cloning by function: an alternative approach for identifying yeast homologs of genes from other organisms.

Authors:  J E Kranz; C Holm
Journal:  Proc Natl Acad Sci U S A       Date:  1990-09       Impact factor: 11.205

2.  Inviability of recA- derivatives of the DNA polymerase mutant of De Lucia and Cairns.

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Journal:  J Mol Biol       Date:  1971-06-14       Impact factor: 5.469

3.  The mechanism of recA polA lethality: suppression by RecA-independent recombination repair activated by the lexA(Def) mutation in Escherichia coli.

Authors:  Y Cao; T Kogoma
Journal:  Genetics       Date:  1995-04       Impact factor: 4.562

4.  A Saccharomyces cerevisiae genomic plasmid bank based on a centromere-containing shuttle vector.

Authors:  M D Rose; P Novick; J H Thomas; D Botstein; G R Fink
Journal:  Gene       Date:  1987       Impact factor: 3.688

5.  Complete enzymatic synthesis of DNA containing the SV40 origin of replication.

Authors:  Y Ishimi; A Claude; P Bullock; J Hurwitz
Journal:  J Biol Chem       Date:  1988-12-25       Impact factor: 5.157

6.  Evidence for involvement of yeast proliferating cell nuclear antigen in DNA mismatch repair.

Authors:  R E Johnson; G K Kovvali; S N Guzder; N S Amin; C Holm; Y Habraken; P Sung; L Prakash; S Prakash
Journal:  J Biol Chem       Date:  1996-11-08       Impact factor: 5.157

7.  Requirement of the yeast RTH1 5' to 3' exonuclease for the stability of simple repetitive DNA.

Authors:  R E Johnson; G K Kovvali; L Prakash; S Prakash
Journal:  Science       Date:  1995-07-14       Impact factor: 47.728

8.  Mammalian DNA polymerase auxiliary proteins: analysis of replication factor C-catalyzed proliferating cell nuclear antigen loading onto circular double-stranded DNA.

Authors:  L M Podust; V N Podust; J M Sogo; U Hübscher
Journal:  Mol Cell Biol       Date:  1995-06       Impact factor: 4.272

9.  Proliferating cell nuclear antigen-dependent abasic site repair in Xenopus laevis oocytes: an alternative pathway of base excision DNA repair.

Authors:  Y Matsumoto; K Kim; D F Bogenhagen
Journal:  Mol Cell Biol       Date:  1994-09       Impact factor: 4.272

10.  DNA polymerase I is required for premeiotic DNA replication and sporulation but not for X-ray repair in Saccharomyces cerevisiae.

Authors:  M E Budd; K D Wittrup; J E Bailey; J L Campbell
Journal:  Mol Cell Biol       Date:  1989-02       Impact factor: 4.272

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  29 in total

Review 1.  Rescue of arrested replication forks by homologous recombination.

Authors:  B Michel; M J Flores; E Viguera; G Grompone; M Seigneur; V Bidnenko
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

Review 2.  DNA replication meets genetic exchange: chromosomal damage and its repair by homologous recombination.

Authors:  A Kuzminov
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

3.  Activation of an alternative, rec12 (spo11)-independent pathway of fission yeast meiotic recombination in the absence of a DNA flap endonuclease.

Authors:  Joseph A Farah; Gareth Cromie; Luther Davis; Walter W Steiner; Gerald R Smith
Journal:  Genetics       Date:  2005-08-22       Impact factor: 4.562

4.  Molecular analysis of sister chromatid recombination in mammalian cells.

Authors:  Nadine Puget; Melodie Knowlton; Ralph Scully
Journal:  DNA Repair (Amst)       Date:  2005-02-03

5.  Pitfalls of the synthetic lethality screen in Saccharomyces cerevisiae: an improved design.

Authors:  Amnon Koren; Shay Ben-Aroya; Rivka Steinlauf; Martin Kupiec
Journal:  Curr Genet       Date:  2003-02-05       Impact factor: 3.886

6.  CDC45 and DPB11 are required for processive DNA replication and resistance to DNA topoisomerase I-mediated DNA damage.

Authors:  R J Reid; P Fiorani; M Sugawara; M A Bjornsti
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-28       Impact factor: 11.205

Review 7.  Minding the gap: the underground functions of BRCA1 and BRCA2 at stalled replication forks.

Authors:  Ganesh Nagaraju; Ralph Scully
Journal:  DNA Repair (Amst)       Date:  2007-03-26

8.  Interactions among DNA ligase I, the flap endonuclease and proliferating cell nuclear antigen in the expansion and contraction of CAG repeat tracts in yeast.

Authors:  Eric W Refsland; Dennis M Livingston
Journal:  Genetics       Date:  2005-08-03       Impact factor: 4.562

9.  Elg1 forms an alternative RFC complex important for DNA replication and genome integrity.

Authors:  Mohammed Bellaoui; Michael Chang; Jiongwen Ou; Hong Xu; Charles Boone; Grant W Brown
Journal:  EMBO J       Date:  2003-08-15       Impact factor: 11.598

10.  A mutant allele of the transcription factor IIH helicase gene, RAD3, promotes loss of heterozygosity in response to a DNA replication defect in Saccharomyces cerevisiae.

Authors:  Michelle S Navarro; Liu Bi; Adam M Bailis
Journal:  Genetics       Date:  2007-05-04       Impact factor: 4.562

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