Literature DB >> 9482816

Comparative genetics in the grasses.

M D Gale1, K M Devos.   

Abstract

Genetic mapping of wheat, maize, and rice and other grass species with common DNA probes has revealed remarkable conservation of gene content and gene order over the 60 million years of radiation of Poaceae. The linear organization of genes in some nine different genomes differing in basic chromosome number from 5 to 12 and nuclear DNA amount from 400 to 6,000 Mb, can be described in terms of only 25 "rice linkage blocks." The extent to which this intergenomic colinearity is confounded at the micro level by gene duplication and micro-rearrangements is still an open question. Nevertheless, it is clear that the elucidation of the organization of the economically important grasses with larger genomes, such as maize (2n = 10, 4,500 Mb DNA), will, to a greater or lesser extent, be predicted from sequence analysis of smaller genomes such as rice, with only 400 Mb, which in turn may be greatly aided by knowledge of the entire sequence of Arabidopsis, which may be available as soon as the turn of the century. Comparative genetics will provide the key to unlock the genomic secrets of crop plants with bigger genomes than Homo sapiens.

Entities:  

Year:  1998        PMID: 9482816      PMCID: PMC33824          DOI: 10.1073/pnas.95.5.1971

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Centromere mapping and orientation of the molecular linkage map of rice (Oryza sativa L.).

Authors:  K Singh; T Ishii; A Parco; N Huang; D S Brar; G S Khush
Journal:  Proc Natl Acad Sci U S A       Date:  1996-06-11       Impact factor: 11.205

2.  Chromosomal location in wheat of the genes coding for the acyl carrier proteins I and III.

Authors:  K M Devos; C N Chinoy; M D Atkinson; L Hansen; P von Wettstein-Knowles; M D Gale
Journal:  Theor Appl Genet       Date:  1991-07       Impact factor: 5.699

3.  The coding sequence for sedoheptulose-1,7-bisphosphatase detects multiple homologues in wheat genomic DNA.

Authors:  K M Devos; M D Atkinson; C N Chinoy; J C Lloyd; C A Raines; T A Dyer; M D Gale
Journal:  Theor Appl Genet       Date:  1992-11       Impact factor: 5.699

4.  Relationships of cereal crops and other grasses.

Authors:  E A Kellogg
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-03       Impact factor: 11.205

5.  Grass genomes.

Authors:  J L Bennetzen; P SanMiguel; M Chen; A Tikhonov; M Francki; Z Avramova
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-03       Impact factor: 11.205

6.  Relationship between chromosome 9 of maize and wheat homeologous group 7 chromosomes.

Authors:  K M Devos; S Chao; Q Y Li; M C Simonetti; M D Gale
Journal:  Genetics       Date:  1994-12       Impact factor: 4.562

7.  Comparative linkage maps of the rice and maize genomes.

Authors:  S Ahn; S D Tanksley
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-01       Impact factor: 11.205

8.  Comparative mapping in grasses. Wheat relationships.

Authors:  A E Van Deynze; J C Nelson; E S Yglesias; S E Harrington; D P Braga; S R McCouch; M E Sorrells
Journal:  Mol Gen Genet       Date:  1995-10-25

9.  Comparative genome analysis of mungbean (Vigna radiata L. Wilczek) and cowpea (V. unguiculata L. Walpers) using RFLP mapping data.

Authors:  D Menancio-Hautea; C A Fatokun; L Kumar; D Danesh; N D Young
Journal:  Theor Appl Genet       Date:  1993-08       Impact factor: 5.699

10.  Comparative mapping in Arabidopsis and Brassica, fine scale genome collinearity and congruence of genes controlling flowering time.

Authors:  U Lagercrantz; J Putterill; G Coupland; D Lydiate
Journal:  Plant J       Date:  1996-01       Impact factor: 6.417

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  241 in total

1.  Patterns of chromosomal duplication in maize and their implications for comparative maps of the grasses.

Authors:  B S Gaut
Journal:  Genome Res       Date:  2001-01       Impact factor: 9.043

2.  Comparative sequence analysis reveals extensive microcolinearity in the lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes.

Authors:  M Rossberg; K Theres; A Acarkan; R Herrero; T Schmitt; K Schumacher; G Schmitz; R Schmidt
Journal:  Plant Cell       Date:  2001-04       Impact factor: 11.277

3.  Arabidopsis-rice: will colinearity allow gene prediction across the eudicot-monocot divide?

Authors:  K M Devos; J Beales; Y Nagamura; T Sasaki
Journal:  Genome Res       Date:  1999-09       Impact factor: 9.043

4.  Comparative genomics, marker density and statistical analysis of chromosome rearrangements.

Authors:  D J Schoen
Journal:  Genetics       Date:  2000-02       Impact factor: 4.562

5.  Comparative genetics of disease resistance within the solanaceae.

Authors:  R C Grube; E R Radwanski; M Jahn
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

Review 6.  Contributions of plant molecular systematics to studies of molecular evolution.

Authors:  E D Soltis; P S Soltis
Journal:  Plant Mol Biol       Date:  2000-01       Impact factor: 4.076

7.  Sequencing the rice genome.

Authors:  N A Eckardt
Journal:  Plant Cell       Date:  2000-11       Impact factor: 11.277

Review 8.  Through a genome, darkly: comparative analysis of plant chromosomal DNA.

Authors:  Graham J King
Journal:  Plant Mol Biol       Date:  2002-01       Impact factor: 4.076

Review 9.  Plant genome evolution: lessons from comparative genomics at the DNA level.

Authors:  Renate Schmidt
Journal:  Plant Mol Biol       Date:  2002-01       Impact factor: 4.076

10.  A fine physical map of the rice chromosome 4.

Authors:  Qiang Zhao; Yu Zhang; Zhukuan Cheng; Mingsheng Chen; Shengyue Wang; Qi Feng; Yucheng Huang; Ying Li; Yesheng Tang; Bo Zhou; Zhehua Chen; Shuliang Yu; Jingjie Zhu; Xin Hu; Jie Mu; Kai Ying; Pei Hao; Lei Zhang; Yiqi Lu; Lei S Zhang; Yilei Liu; Zhen Yu; Danlin Fan; Qijun Weng; Ling Chen; Tingting Lu; Xiaohui Liu; Peixin Jia; Tongguo Sun; Yongrui Wu; Yujun Zhang; Ying Lu; Can Li; Rong Wang; Haiyan Lei; Tao Li; Hao Hu; Mei Wu; Runquan Zhang; Jianping Guan; Jia Zhu; Gang Fu; Minghong Gu; Guofan Hong; Yongbiao Xue; Rod Wing; Jiming Jiang; Bin Han
Journal:  Genome Res       Date:  2002-05       Impact factor: 9.043

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