Literature DB >> 8103599

Comparative linkage maps of the rice and maize genomes.

S Ahn1, S D Tanksley.   

Abstract

Genetic linkage maps have been constructed for the rice and maize genomes on the basis of orthologous loci detected with a common set of cDNA clones. Conserved linkage groups could be identified, which together account for more than two-thirds of both genomes. In some instances, entire chromosomes or chromosome arms are nearly identical with respect to gene order and gene content. The results also reveal that most of the genes (> 72%) duplicated during ancient polyploidization are still present in the maize genome in duplicate copy. The comparative maps of rice and maize provide a basis for interpreting molecular, genetic, and breeding information between these two important species and establish a framework for ultimately connecting the genetics of all grass species.

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Year:  1993        PMID: 8103599      PMCID: PMC47271          DOI: 10.1073/pnas.90.17.7980

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  14 in total

1.  High density molecular linkage maps of the tomato and potato genomes.

Authors:  S D Tanksley; M W Ganal; J P Prince; M C de Vicente; M W Bonierbale; P Broun; T M Fulton; J J Giovannoni; S Grandillo; G B Martin
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

Review 2.  Recombinant inbreds for molecular mapping in maize: theoretical and practical considerations.

Authors:  B Burr; F A Burr
Journal:  Trends Genet       Date:  1991-02       Impact factor: 11.639

3.  Conservation of gene repertoire but not gene order in pepper and tomato.

Authors:  S D Tanksley; R Bernatzky; N L Lapitan; J P Prince
Journal:  Proc Natl Acad Sci U S A       Date:  1988-09       Impact factor: 11.205

4.  Identification of the genomic locations of duplicate nucleotide sequences in maize by analysis of restriction fragment length polymorphisms.

Authors:  T Helentjaris; D Weber; S Wright
Journal:  Genetics       Date:  1988-02       Impact factor: 4.562

5.  Genetic mapping and characterization of sorghum and related crops by means of maize DNA probes.

Authors:  S H Hulbert; T E Richter; J D Axtell; J L Bennetzen
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

6.  Molecular-marker-facilitated investigations of quantitative-trait loci in maize. I. Numbers, genomic distribution and types of gene action.

Authors:  M D Edwards; C W Stuber; J F Wendel
Journal:  Genetics       Date:  1987-05       Impact factor: 4.562

7.  RFLP Maps Based on a Common Set of Clones Reveal Modes of Chromosomal Evolution in Potato and Tomato.

Authors:  M W Bonierbale; R L Plaisted; S D Tanksley
Journal:  Genetics       Date:  1988-12       Impact factor: 4.562

8.  Comparative genome mapping of Sorghum and maize.

Authors:  R Whitkus; J Doebley; M Lee
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

9.  Evidence for orthologous seed weight genes in cowpea and mung bean based on RFLP mapping.

Authors:  C A Fatokun; D I Menancio-Hautea; D Danesh; N D Young
Journal:  Genetics       Date:  1992-11       Impact factor: 4.562

10.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736

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  194 in total

1.  Patterns of chromosomal duplication in maize and their implications for comparative maps of the grasses.

Authors:  B S Gaut
Journal:  Genome Res       Date:  2001-01       Impact factor: 9.043

2.  Identification and physical localization of useful genes and markers to a major gene-rich region on wheat group 1S chromosomes.

Authors:  D Sandhu; J A Champoux; S N Bondareva; K S Gill
Journal:  Genetics       Date:  2001-04       Impact factor: 4.562

3.  Regional expression of the rice KN1-type homeobox gene family during embryo, shoot, and flower development.

Authors:  N Sentoku; Y Sato; N Kurata; Y Ito; H Kitano; M Matsuoka
Journal:  Plant Cell       Date:  1999-09       Impact factor: 11.277

4.  Colinearity and its exceptions in orthologous adh regions of maize and sorghum.

Authors:  A P Tikhonov; P J SanMiguel; Y Nakajima; N M Gorenstein; J L Bennetzen; Z Avramova
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-22       Impact factor: 11.205

5.  Comparative genomics, marker density and statistical analysis of chromosome rearrangements.

Authors:  D J Schoen
Journal:  Genetics       Date:  2000-02       Impact factor: 4.562

Review 6.  Knots in the family tree: evolutionary relationships and functions of knox homeobox genes.

Authors:  L Reiser; P Sánchez-Baracaldo; S Hake
Journal:  Plant Mol Biol       Date:  2000-01       Impact factor: 4.076

7.  The narrow sheath duplicate genes: sectors of dual aneuploidy reveal ancestrally conserved gene functions during maize leaf development.

Authors:  M J Scanlon; K D Chen; I V McKnight CC
Journal:  Genetics       Date:  2000-07       Impact factor: 4.562

Review 8.  Through a genome, darkly: comparative analysis of plant chromosomal DNA.

Authors:  Graham J King
Journal:  Plant Mol Biol       Date:  2002-01       Impact factor: 4.076

Review 9.  Plant genome evolution: lessons from comparative genomics at the DNA level.

Authors:  Renate Schmidt
Journal:  Plant Mol Biol       Date:  2002-01       Impact factor: 4.076

10.  Bacterial artificial chromosome-based physical map of the rice genome constructed by restriction fingerprint analysis.

Authors:  Q Tao; Y L Chang; J Wang; H Chen; M N Islam-Faridi; C Scheuring; B Wang; D M Stelly; H B Zhang
Journal:  Genetics       Date:  2001-08       Impact factor: 4.562

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