Literature DB >> 9466765

Stability of human immunodeficiency virus RNA in blood specimens as measured by a commercial PCR-based assay.

K Sebire1, K McGavin, S Land, T Middleton, C Birch.   

Abstract

We investigated the effects of conditions often encountered during handling, transit, and storage of blood specimens on the quantity of detectable human immunodeficiency virus (HIV) RNA in plasma. HIV RNA copy numbers were measured with a commercially available assay (the Amplicor HIV-1 Monitor test kit). Variables examined were the time to processing of blood and plasma, the holding temperature of blood and plasma prior to processing, the effect of freezing and thawing of plasma, and the use of different anticoagulants. The relationship between the HIV RNA copy number and the HIV isolation rate by peripheral blood mononuclear cell (PBMC) coculture was also examined. We found that RNA copy numbers were maintained to within 0.5 log10 (approximately threefold) in blood and plasma samples held at room temperature or 4 degrees C for up to 3 days and remained stable despite (limited) freezing and thawing of the plasma. HIV RNA copy numbers were also maintained after long-term storage of plasma at -70 degrees C. The ability to isolate HIV from PBMCs was directly proportional to the HIV RNA copy number.

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Year:  1998        PMID: 9466765      PMCID: PMC104566     

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  28 in total

1.  Quantitation of human immunodeficiency virus by culture and polymerase chain reaction in response to didanosine after long-term therapy with zidovudine.

Authors:  D A Katzenstein; M Winters; J Bubp; D Israelski; E Winger; T C Merigan
Journal:  J Infect Dis       Date:  1994-02       Impact factor: 5.226

2.  Diurnal and short-term stability of HIV virus load as measured by gene amplification.

Authors:  M Holodniy; L Mole; M Winters; T C Merigan
Journal:  J Acquir Immune Defic Syndr (1988)       Date:  1994-04

Review 3.  Monitoring the activity of antiviral therapy for HIV infection using a polymerase chain reaction method coupled with reverse transcription.

Authors:  E Kojima; T Shirasaka; B Anderson; S Chokekijchai; S Sei; R Yarchoan; H Mitsuya
Journal:  AIDS       Date:  1993-11       Impact factor: 4.177

4.  High levels of HIV-1 in plasma during all stages of infection determined by competitive PCR.

Authors:  M Piatak; M S Saag; L C Yang; S J Clark; J C Kappes; K C Luk; B H Hahn; G M Shaw; J D Lifson
Journal:  Science       Date:  1993-03-19       Impact factor: 47.728

5.  Quantification of human immunodeficiency virus in plasma by RNA PCR, viral culture, and p24 antigen detection.

Authors:  I Van Kerckhoven; K Fransen; M Peeters; H De Beenhouwer; P Piot; G van der Groen
Journal:  J Clin Microbiol       Date:  1994-07       Impact factor: 5.948

6.  Rapid turnover of plasma virions and CD4 lymphocytes in HIV-1 infection.

Authors:  D D Ho; A U Neumann; A S Perelson; W Chen; J M Leonard; M Markowitz
Journal:  Nature       Date:  1995-01-12       Impact factor: 49.962

7.  Multicenter evaluation of quantification methods for plasma human immunodeficiency virus type 1 RNA.

Authors:  H J Lin; L E Myers; B Yen-Lieberman; F B Hollinger; D Henrard; C J Hooper; R Kokka; S Kwok; S Rasheed; M Vahey
Journal:  J Infect Dis       Date:  1994-09       Impact factor: 5.226

8.  Cell-free plasma human immunodeficiency virus type 1 titer assessed by culture and immunocapture-reverse transcription-polymerase chain reaction.

Authors:  R W Coombs; D R Henrard; W F Mehaffey; J Gibson; E Eggert; T C Quinn; J Phillips
Journal:  J Clin Microbiol       Date:  1993-08       Impact factor: 5.948

9.  Quantitation of HIV-1 RNA in plasma predicts outcome after seroconversion.

Authors:  J W Mellors; L A Kingsley; C R Rinaldo; J A Todd; B S Hoo; R P Kokka; P Gupta
Journal:  Ann Intern Med       Date:  1995-04-15       Impact factor: 25.391

10.  Biological variation and quality control of plasma human immunodeficiency virus type 1 RNA quantitation by reverse transcriptase polymerase chain reaction.

Authors:  M A Winters; L B Tan; D A Katzenstein; T C Merigan
Journal:  J Clin Microbiol       Date:  1993-11       Impact factor: 5.948

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  13 in total

1.  Investigation of effects of acid citrate dextrose and EDTA on ability to quantitatively culture human immunodeficiency virus.

Authors:  C Jennings; J W Bremer; D J Brambilla
Journal:  J Clin Microbiol       Date:  2000-09       Impact factor: 5.948

2.  Stability of hepatitis C virus, HIV, and hepatitis B virus nucleic acids in plasma samples after long-term storage at -20°C and -70°C.

Authors:  Cristina Baleriola; Harpreet Johal; Brendan Jacka; Sandra Chaverot; Scott Bowden; Sara Lacey; William Rawlinson
Journal:  J Clin Microbiol       Date:  2011-07-13       Impact factor: 5.948

3.  Hepatitis B virus DNA stability in plasma samples under short-term storage at 42°C.

Authors:  R W de Almeida; M P Espírito-Santo; P S F Sousa; A J de Almeida; E Lampe; L L Lewis-Ximenez
Journal:  Braz J Med Biol Res       Date:  2015-03-13       Impact factor: 2.590

4.  Increased blood-brain barrier permeability in neuro-asymptomatic HIV-1-infected individuals--correlation with cerebrospinal fluid HIV-1 RNA and neopterin levels.

Authors:  L M Andersson; L Hagberg; D Fuchs; B Svennerholm; M Gisslén
Journal:  J Neurovirol       Date:  2001-12       Impact factor: 2.643

5.  Comparison of the abbott 7000 and bayer 340 systems for measurement of hepatitis C virus load.

Authors:  Helene C Highbarger; Zonghui Hu; Shyam Kottilil; Julia A Metcalf; Michael A Polis; M B Vasudevachari; H Clifford Lane; Robin L Dewar
Journal:  J Clin Microbiol       Date:  2007-06-27       Impact factor: 5.948

6.  Quantitation of human immunodeficiency virus type 1 in breast milk.

Authors:  M K Ghosh; L Kuhn; J West; K Semrau; D Decker; D M Thea; G M Aldrovandi
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

7.  Alternative Sample Types for HIV-1 Antiretroviral Drug Resistance Testing.

Authors:  Dolly Singh; Adit Dhummakupt; Lilly Siems; Deborah Persaud
Journal:  J Infect Dis       Date:  2017-12-01       Impact factor: 5.226

8.  Comparative evaluation of the performance of the Abbott RealTime HIV-1 assay for measurement of HIV-1 plasma viral load on genetically diverse samples from Greece.

Authors:  Antigoni Katsoulidou; Chrysoula Rokka; Catherine Issaris; Catherine Haida; Kimon Tzannis; Vana Sypsa; Maria Detsika; Dimitrios Paraskevis; Angelos Hatzakis
Journal:  Virol J       Date:  2011-01-11       Impact factor: 4.099

9.  Circumcision status at HIV infection is not associated with plasma viral load in men: analysis of specimens from a randomized controlled trial.

Authors:  Stephanie M Davis; Sherri Pals; Chunfu Yang; Elijah Odoyo-June; Joy Chang; Maroya Spalding Walters; Walter Jaoko; Naomi Bock; Larry Westerman; Carlos Toledo; Robert C Bailey
Journal:  BMC Infect Dis       Date:  2018-07-28       Impact factor: 3.090

Review 10.  Bio-banking in microbiology: from sample collection to epidemiology, diagnosis and research.

Authors:  Paolo De Paoli
Journal:  FEMS Microbiol Rev       Date:  2005-02-26       Impact factor: 16.408

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