Literature DB >> 9465072

New Drosophila introns originate by duplication.

R Tarrío1, F Rodríguez-Trelles, F J Ayala.   

Abstract

We have analyzed the phylogenetic distribution of introns in the gene coding for xanthine dehydrogenase in 37 species, including 31 dipterans sequenced by us. We have discovered three narrowly distributed novel introns, one in the medfly Ceratitis capitata, the second in the willistoni and saltans groups of Drosophila, and the third in two sibling species of the willistoni group. The phylogenetic distribution of these introns favors the "introns-late" theory of the origin of genes. Analysis of the nucleotide sequences indicates that all three introns have arisen by duplication of a preexisting intron, which is pervasive in Drosophila and other dipterans (and has a homologous position as an intron found in humans and other diverse organisms).

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Year:  1998        PMID: 9465072      PMCID: PMC19138          DOI: 10.1073/pnas.95.4.1658

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  On the antiquity of introns.

Authors:  W Gilbert; M Marchionni; G McKnight
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2.  The gene for the U6 small nuclear RNA in fission yeast has an intron.

Authors:  T Tani; Y Ohshima
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3.  Intron "sliding" and the diversity of intron positions.

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4.  Sequence of the structural gene for xanthine dehydrogenase (rosy locus) in Drosophila melanogaster.

Authors:  T P Keith; M A Riley; M Kreitman; R C Lewontin; D Curtis; G Chambers
Journal:  Genetics       Date:  1987-05       Impact factor: 4.562

5.  Selfish DNA and the origin of introns.

Authors:  T Cavalier-Smith
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6.  The exon theory of genes.

Authors:  W Gilbert
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7.  Pseudogenes in yeast?

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8.  Mutations affecting expression of the rosy locus in Drosophila melanogaster.

Authors:  C S Lee; D Curtis; M McCarron; C Love; M Gray; W Bender; A Chovnick
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9.  DNA sequencing with chain-terminating inhibitors.

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  16 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

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5.  Alternative splicing: a missing piece in the puzzle of intron gain.

Authors:  Rosa Tarrío; Francisco J Ayala; Francisco Rodríguez-Trelles
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7.  Isolation and characterization of the Xanthine dehydrogenase gene of the Mediterranean fruit fly, Ceratitis capitata.

Authors:  R J Pitts; L J Zwiebel
Journal:  Genetics       Date:  2001-08       Impact factor: 4.562

8.  Switch in codon bias and increased rates of amino acid substitution in the Drosophila saltans species group.

Authors:  F Rodríguez-Trelles; R Tarrío; F J Ayala
Journal:  Genetics       Date:  1999-09       Impact factor: 4.562

9.  Mystery of intron gain.

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10.  Origins of recently gained introns in Caenorhabditis.

Authors:  Avril Coghlan; Kenneth H Wolfe
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-08       Impact factor: 11.205

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