Literature DB >> 9435224

Thermostabilization and thermoactivation of thermolabile enzymes by trehalose and its application for the synthesis of full length cDNA.

P Carninci1, Y Nishiyama, A Westover, M Itoh, S Nagaoka, N Sasaki, Y Okazaki, M Muramatsu, Y Hayashizaki.   

Abstract

The advent of thermostable enzymes has led to great advances in molecular biology, such as the development of PCR and ligase chain reaction. However, isolation of naturally thermostable enzymes has been restricted to those existing in thermophylic bacteria. Here, we show that the disaccharide trehalose enables enzymes to maintain their normal activity (thermostabilization) or even to increase activity at high temperatures (thermoactivation) at which they are normally inactive. We also demonstrate how enzyme thermoactivation can improve the reverse transcriptase, reaction. In fact, thermoactivated reverse transcriptase, which displays full activity even at 60 degrees C, was powerful enough to synthesize full length cDNA without the early termination usually induced by stable secondary structures of mRNA.

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Year:  1998        PMID: 9435224      PMCID: PMC18452          DOI: 10.1073/pnas.95.2.520

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  14 in total

1.  Extraordinary stability of enzymes dried in trehalose: simplified molecular biology.

Authors:  C Colaço; S Sen; M Thangavelu; S Pinder; B Roser
Journal:  Biotechnology (N Y)       Date:  1992-09

2.  Reverse transcription and DNA amplification by a Thermus thermophilus DNA polymerase.

Authors:  T W Myers; D H Gelfand
Journal:  Biochemistry       Date:  1991-08-06       Impact factor: 3.162

3.  High efficiency selection of full-length cDNA by improved biotinylated cap trapper.

Authors:  P Carninci; A Westover; Y Nishiyama; T Ohsumi; M Itoh; S Nagaoka; N Sasaki; Y Okazaki; M Muramatsu; C Schneider; Y Hayashizaki
Journal:  DNA Res       Date:  1997-02-28       Impact factor: 4.458

4.  Trehalose accumulates in Saccharomyces cerevisiae during exposure to agents that induce heat shock response.

Authors:  P V Attfield
Journal:  FEBS Lett       Date:  1987-12-10       Impact factor: 4.124

5.  Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.

Authors:  R K Saiki; D H Gelfand; S Stoffel; S J Scharf; R Higuchi; G T Horn; K B Mullis; H A Erlich
Journal:  Science       Date:  1988-01-29       Impact factor: 47.728

6.  Rapid changes of heat and desiccation tolerance correlated with changes of trehalose content in Saccharomyces cerevisiae cells subjected to temperature shifts.

Authors:  T Hottiger; T Boller; A Wiemken
Journal:  FEBS Lett       Date:  1987-08-10       Impact factor: 4.124

7.  Enzymatic catalysis in organic media at 100 degrees C.

Authors:  A Zaks; A M Klibanov
Journal:  Science       Date:  1984-06-15       Impact factor: 47.728

8.  High-efficiency full-length cDNA cloning by biotinylated CAP trapper.

Authors:  P Carninci; C Kvam; A Kitamura; T Ohsumi; Y Okazaki; M Itoh; M Kamiya; K Shibata; N Sasaki; M Izawa; M Muramatsu; Y Hayashizaki; C Schneider
Journal:  Genomics       Date:  1996-11-01       Impact factor: 5.736

9.  The role of trehalose synthesis for the acquisition of thermotolerance in yeast. II. Physiological concentrations of trehalose increase the thermal stability of proteins in vitro.

Authors:  T Hottiger; C De Virgilio; M N Hall; T Boller; A Wiemken
Journal:  Eur J Biochem       Date:  1994-01-15

10.  Genetic disease detection and DNA amplification using cloned thermostable ligase.

Authors:  F Barany
Journal:  Proc Natl Acad Sci U S A       Date:  1991-01-01       Impact factor: 11.205

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  61 in total

1.  DNA data bank of Japan (DDBJ) in collaboration with mass sequencing teams.

Authors:  Y Tateno; S Miyazaki; M Ota; H Sugawara; T Gojobori
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Computer-based methods for the mouse full-length cDNA encyclopedia: real-time sequence clustering for construction of a nonredundant cDNA library.

Authors:  H Konno; Y Fukunishi; K Shibata; M Itoh; P Carninci; Y Sugahara; Y Hayashizaki
Journal:  Genome Res       Date:  2001-02       Impact factor: 9.043

3.  RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

Authors:  K Shibata; M Itoh; K Aizawa; S Nagaoka; N Sasaki; P Carninci; H Konno; J Akiyama; K Nishi; T Kitsunai; H Tashiro; M Itoh; N Sumi; Y Ishii; S Nakamura; M Hazama; T Nishine; A Harada; R Yamamoto; H Matsumoto; S Sakaguchi; T Ikegami; K Kashiwagi; S Fujiwake; K Inoue; Y Togawa
Journal:  Genome Res       Date:  2000-11       Impact factor: 9.043

4.  Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

Authors:  P Carninci; Y Shibata; N Hayatsu; Y Sugahara; K Shibata; M Itoh; H Konno; Y Okazaki; M Muramatsu; Y Hayashizaki
Journal:  Genome Res       Date:  2000-10       Impact factor: 9.043

5.  A system for specific, high-throughput genotyping by allele-specific primer extension on microarrays.

Authors:  T Pastinen; M Raitio; K Lindroos; P Tainola; L Peltonen; A C Syvänen
Journal:  Genome Res       Date:  2000-07       Impact factor: 9.043

6.  Trehalose-enhanced isolation of neuronal sub-types from adult mouse brain.

Authors:  Alka Saxena; Akiko Wagatsuma; Yukihiko Noro; Takenobu Kuji; Atsuko Asaka-Oba; Akira Watahiki; Cecile Gurnot; Michela Fagiolini; Takao K Hensch; Piero Carninci
Journal:  Biotechniques       Date:  2012-06       Impact factor: 1.993

7.  Characterization of a bifunctional enzyme fusion of trehalose-6-phosphate synthetase and trehalose-6-phosphate phosphatase of Escherichia coli.

Authors:  H S Seo; Y J Koo; J Y Lim; J T Song; C H Kim; J K Kim; J S Lee; Y D Choi
Journal:  Appl Environ Microbiol       Date:  2000-06       Impact factor: 4.792

Review 8.  A new look at xylanases: an overview of purification strategies.

Authors:  Paula Sá-Pereira; Helena Paveia; Maria Costa-Ferreira; Maria Aires-Barros
Journal:  Mol Biotechnol       Date:  2003-07       Impact factor: 2.695

9.  Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia.

Authors:  Piero Carninci; Kazunori Waki; Toshiyuki Shiraki; Hideaki Konno; Kazuhiro Shibata; Masayoshi Itoh; Katsunori Aizawa; Takahiro Arakawa; Yoshiyuki Ishii; Daisuke Sasaki; Hidemasa Bono; Shinji Kondo; Yuichi Sugahara; Rintaro Saito; Naoki Osato; Shiro Fukuda; Kenjiro Sato; Akira Watahiki; Tomoko Hirozane-Kishikawa; Mari Nakamura; Yuko Shibata; Ayako Yasunishi; Noriko Kikuchi; Atsushi Yoshiki; Moriaki Kusakabe; Stefano Gustincich; Kirk Beisel; William Pavan; Vassilis Aidinis; Akira Nakagawara; William A Held; Hiroo Iwata; Tomohiro Kono; Hiromitsu Nakauchi; Paul Lyons; Christine Wells; David A Hume; Michela Fagiolini; Takao K Hensch; Michelle Brinkmeier; Sally Camper; Junji Hirota; Peter Mombaerts; Masami Muramatsu; Yasushi Okazaki; Jun Kawai; Yoshihide Hayashizaki
Journal:  Genome Res       Date:  2003-06       Impact factor: 9.043

10.  High-throughput viral expression of cDNA-green fluorescent protein fusions reveals novel subcellular addresses and identifies unique proteins that interact with plasmodesmata.

Authors:  Nieves Medina Escobar; Sophie Haupt; Graham Thow; Petra Boevink; Sean Chapman; Karl Oparka
Journal:  Plant Cell       Date:  2003-07       Impact factor: 11.277

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