Literature DB >> 22668417

Trehalose-enhanced isolation of neuronal sub-types from adult mouse brain.

Alka Saxena1, Akiko Wagatsuma, Yukihiko Noro, Takenobu Kuji, Atsuko Asaka-Oba, Akira Watahiki, Cecile Gurnot, Michela Fagiolini, Takao K Hensch, Piero Carninci.   

Abstract

Efficient isolation of specific, intact, living neurons from the adult brain is problematic due to the complex nature of the extracellular matrix consolidating the neuronal network. Here, we present significant improvements to the protocol for isolation of pure populations of neurons from mature postnatal mouse brain using fluorescence activated cell sorting (FACS). The 10-fold increase in cell yield enables cell-specific transcriptome analysis by protocols such as nanoCAGE and RNA seq.

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Year:  2012        PMID: 22668417      PMCID: PMC3696583          DOI: 10.2144/0000113878

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  40 in total

1.  Single-cell transcriptional analysis of neuronal progenitors.

Authors:  Ian Tietjen; Jason M Rihel; Yanxiang Cao; Georgy Koentges; Lisa Zakhary; Catherine Dulac
Journal:  Neuron       Date:  2003-04-24       Impact factor: 17.173

2.  Intracellular trehalose improves the survival of cryopreserved mammalian cells.

Authors:  A Eroglu; M J Russo; R Bieganski; A Fowler; S Cheley; H Bayley; M Toner
Journal:  Nat Biotechnol       Date:  2000-02       Impact factor: 54.908

3.  Flow cytometric analysis of neural stem cells in the developing and adult mouse brain.

Authors:  Ayako Murayama; Yumi Matsuzaki; Ayano Kawaguchi; Takuya Shimazaki; Hideyuki Okano
Journal:  J Neurosci Res       Date:  2002-09-15       Impact factor: 4.164

4.  Cryopreservation of fetal skin is improved by extracellular trehalose.

Authors:  Gulsun Erdag; Ali Eroglu; Jeffrey Morgan; Mehmet Toner
Journal:  Cryobiology       Date:  2002-06       Impact factor: 2.487

5.  FACS purification of immunolabeled cell types from adult rat brain.

Authors:  Danielle Guez-Barber; Sanya Fanous; Brandon K Harvey; Yongqing Zhang; Elin Lehrmann; Kevin G Becker; Marina R Picciotto; Bruce T Hope
Journal:  J Neurosci Methods       Date:  2011-09-03       Impact factor: 2.390

6.  Direct isolation of committed neuronal progenitor cells from transgenic mice coexpressing spectrally distinct fluorescent proteins regulated by stage-specific neural promoters.

Authors:  K Sawamoto; A Yamamoto; A Kawaguchi; M Yamaguchi; K Mori; S A Goldman; H Okano
Journal:  J Neurosci Res       Date:  2001-08-01       Impact factor: 4.164

7.  Purification of a pluripotent neural stem cell from the adult mouse brain.

Authors:  R L Rietze; H Valcanis; G F Brooker; T Thomas; A K Voss; P F Bartlett
Journal:  Nature       Date:  2001-08-16       Impact factor: 49.962

8.  Protective role of trehalose during severe oxidative stress caused by hydrogen peroxide and the adaptive oxidative stress response in Candida albicans.

Authors:  Francisco J Alvarez-Peral; Oscar Zaragoza; Yolanda Pedreno; Juan-Carlos Argüelles
Journal:  Microbiology       Date:  2002-08       Impact factor: 2.777

9.  In vivo labeling of parvalbumin-positive interneurons and analysis of electrical coupling in identified neurons.

Authors:  Axel H Meyer; István Katona; Maria Blatow; Andrei Rozov; Hannah Monyer
Journal:  J Neurosci       Date:  2002-08-15       Impact factor: 6.167

10.  PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes.

Authors:  Vamsi K Mootha; Cecilia M Lindgren; Karl-Fredrik Eriksson; Aravind Subramanian; Smita Sihag; Joseph Lehar; Pere Puigserver; Emma Carlsson; Martin Ridderstråle; Esa Laurila; Nicholas Houstis; Mark J Daly; Nick Patterson; Jill P Mesirov; Todd R Golub; Pablo Tamayo; Bruce Spiegelman; Eric S Lander; Joel N Hirschhorn; David Altshuler; Leif C Groop
Journal:  Nat Genet       Date:  2003-07       Impact factor: 38.330

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  37 in total

1.  Self-Reporting Transposons Enable Simultaneous Readout of Gene Expression and Transcription Factor Binding in Single Cells.

Authors:  Arnav Moudgil; Michael N Wilkinson; Xuhua Chen; June He; Alexander J Cammack; Michael J Vasek; Tomás Lagunas; Zongtai Qi; Matthew A Lalli; Chuner Guo; Samantha A Morris; Joseph D Dougherty; Robi D Mitra
Journal:  Cell       Date:  2020-07-24       Impact factor: 41.582

2.  GPRIN3 Controls Neuronal Excitability, Morphology, and Striatal-Dependent Behaviors in the Indirect Pathway of the Striatum.

Authors:  Deniz Karadurmus; Daniel Rial; Jean-François De Backer; David Communi; Alban de Kerchove d'Exaerde; Serge N Schiffmann
Journal:  J Neurosci       Date:  2019-07-30       Impact factor: 6.167

3.  Neurocytometry: Flow Cytometric Sorting of Specific Neuronal Populations from Human and Rodent Brain.

Authors:  David Martin; Jiaxi Xu; Connie Porretta; Charles D Nichols
Journal:  ACS Chem Neurosci       Date:  2017-02-01       Impact factor: 4.418

4.  Molecular Signatures of Psychosocial Stress and Cognition Are Modulated by Chronic Lithium Treatment.

Authors:  Magdalena M Brzózka; Ursula Havemann-Reinecke; Sven P Wichert; Peter Falkai; Moritz J Rossner
Journal:  Schizophr Bull       Date:  2015-12-28       Impact factor: 9.306

5.  Single-Cell RNA-Seq of Mouse Dopaminergic Neurons Informs Candidate Gene Selection for Sporadic Parkinson Disease.

Authors:  Paul W Hook; Sarah A McClymont; Gabrielle H Cannon; William D Law; A Jennifer Morton; Loyal A Goff; Andrew S McCallion
Journal:  Am J Hum Genet       Date:  2018-03-01       Impact factor: 11.025

6.  Flow Cytometric Detection of PrPSc in Neurons and Glial Cells from Prion-Infected Mouse Brains.

Authors:  Takeshi Yamasaki; Akio Suzuki; Rie Hasebe; Motohiro Horiuchi
Journal:  J Virol       Date:  2017-12-14       Impact factor: 5.103

7.  Clock genes control cortical critical period timing.

Authors:  Yohei Kobayashi; Zhanlei Ye; Takao K Hensch
Journal:  Neuron       Date:  2015-03-19       Impact factor: 17.173

8.  hVGAT-mCherry: A novel molecular tool for analysis of GABAergic neurons derived from human pluripotent stem cells.

Authors:  Brooke A DeRosa; Kinsley C Belle; Blake J Thomas; Holly N Cukier; Margaret A Pericak-Vance; Jeffery M Vance; Derek M Dykxhoorn
Journal:  Mol Cell Neurosci       Date:  2015-08-16       Impact factor: 4.314

9.  Identification of differentially expressed genes during development of the zebrafish pineal complex using RNA sequencing.

Authors:  Sataree Khuansuwan; Joshua T Gamse
Journal:  Dev Biol       Date:  2014-08-28       Impact factor: 3.582

10.  Genome-Wide Analysis of Differential Gene Expression and Splicing in Excitatory Neurons and Interneuron Subtypes.

Authors:  Melanie A Huntley; Karpagam Srinivasan; Brad A Friedman; Tzu-Ming Wang; Ada X Yee; Yuanyuan Wang; Josh S Kaminker; Morgan Sheng; David V Hansen; Jesse E Hanson
Journal:  J Neurosci       Date:  2019-12-12       Impact factor: 6.167

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