Literature DB >> 9425085

Slow cooperative folding of a small globular protein HPr.

N A Van Nuland1, W Meijberg, J Warner, V Forge, R M Scheek, G T Robillard, C M Dobson.   

Abstract

The folding of an 85-residue protein, the histidine-containing phosphocarrier protein HPr, has been studied using a variety of techniques including DSC, CD, ANS fluorescence, and NMR spectroscopy. In both kinetic and equilibrium experiments the unfolding of HPr can be adequately described as a two-state process which does not involve the accumulation of intermediates. Thermodynamic characterization of the native and the transition states has been achieved from both equilibrium and kinetic experiments. The heat capacity change from the denatured state to the transition state (3. 2 kJ mol-1 K-1) is half of the heat capacity difference between the native and denatured states (6.3 kJ mol-1 K-1), while the solvent accessibility of the transition state (0.36) indicates that its compactness is closer to that of the native than that of the denatured state. The high value for the change in heat capacity upon unfolding results in the observation of cold denaturation at moderate denaturant concentrations. Refolding from high denaturant concentrations is, however, slow. The rate constant of folding in water, (14.9 s-1), is small compared to that reported for other proteins of similar size under similar conditions. This indicates that very fast refolding is not a universal character of small globular proteins which fold in the absence of detectable intermediates.

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Year:  1998        PMID: 9425085     DOI: 10.1021/bi9717946

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  High-sensitivity fluorescence anisotropy detection of protein-folding events: application to alpha-lactalbumin.

Authors:  D Canet; K Doering; C M Dobson; Y Dupont
Journal:  Biophys J       Date:  2001-04       Impact factor: 4.033

2.  Folding rate prediction using total contact distance.

Authors:  Hongyi Zhou; Yaoqi Zhou
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

3.  Contact order revisited: influence of protein size on the folding rate.

Authors:  Dmitry N Ivankov; Sergiy O Garbuzynskiy; Eric Alm; Kevin W Plaxco; David Baker; Alexei V Finkelstein
Journal:  Protein Sci       Date:  2003-09       Impact factor: 6.725

4.  Expression and characterization of the intact N-terminal domain of streptokinase.

Authors:  A I Azuaga; N D Woodruff; F Conejero-Lara; V F Cox; R A Smith; C M Dobson
Journal:  Protein Sci       Date:  1999-02       Impact factor: 6.725

5.  Chevron behavior and isostable enthalpic barriers in protein folding: successes and limitations of simple Gō-like modeling.

Authors:  Hüseyin Kaya; Zhirong Liu; Hue Sun Chan
Journal:  Biophys J       Date:  2005-04-29       Impact factor: 4.033

6.  Comparative NMR study on the impact of point mutations on protein stability of Pseudomonas mendocina lipase.

Authors:  Nathalie Sibille; Adrien Favier; Ana I Azuaga; Grant Ganshaw; Richard Bott; Alexandre M J J Bonvin; Rolf Boelens; Nico A J van Nuland
Journal:  Protein Sci       Date:  2006-07-05       Impact factor: 6.725

7.  BPPred: a Web-based computational tool for predicting biophysical parameters of proteins.

Authors:  Christian D Geierhaas; Adrian A Nickson; Kresten Lindorff-Larsen; Jane Clarke; Michele Vendruscolo
Journal:  Protein Sci       Date:  2006-11-22       Impact factor: 6.725

8.  Probing the protein-folding mechanism using denaturant and temperature effects on rate constants.

Authors:  Emily J Guinn; Wayne S Kontur; Oleg V Tsodikov; Irina Shkel; M Thomas Record
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

9.  Conformational stability and aggregation of therapeutic monoclonal antibodies studied with ANS and Thioflavin T binding.

Authors:  Veysel Kayser; Naresh Chennamsetty; Vladimir Voynov; Bernhard Helk; Bernhardt L Trout
Journal:  MAbs       Date:  2011-07-01       Impact factor: 5.857

10.  Characterization of the Folding of a 52-Knotted Protein Using Engineered Single-Tryptophan Variants.

Authors:  Hongyu Zhang; Sophie E Jackson
Journal:  Biophys J       Date:  2016-12-20       Impact factor: 4.033

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