Literature DB >> 9406184

Identification of microorganisms using random primed PCR.

A J Mileham1.   

Abstract

The polymerase chain reaction has facilitated the use of molecular approaches in microbiology including new strategies for the rapid identification of micro-organisms. Approaches based on the use of random primers and standard conditions, allows characteristic DNA fingerprints to be generated from any micro-organism even in the absence of information about its DNA sequence. Different primers can be used to produce genus-specific, species-specific, or even strain-specific DNA fingerprints. This article covers the background to this strategy, describes three different approaches to generating DNA fingerprints using random primers, and provides experimental detail for one method, RAPD.

Mesh:

Substances:

Year:  1997        PMID: 9406184     DOI: 10.1007/BF02752258

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  15 in total

1.  DNA amplification fingerprinting using very short arbitrary oligonucleotide primers.

Authors:  G Caetano-Anollés; B J Bassam; P M Gresshoff
Journal:  Biotechnology (N Y)       Date:  1991-06

2.  Rapid genomic fingerprinting of Lactococcus lactis strains by arbitrarily primed polymerase chain reaction with 32P and fluorescent labels.

Authors:  M R Cancilla; I B Powell; A J Hillier; B E Davidson
Journal:  Appl Environ Microbiol       Date:  1992-05       Impact factor: 4.792

3.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

4.  Concentration of primer and template qualitatively affects products in random-amplified polymorphic DNA PCR.

Authors:  K Muralidharan; E K Wakeland
Journal:  Biotechniques       Date:  1993-03       Impact factor: 1.993

5.  Fingerprinting genomes using PCR with arbitrary primers.

Authors:  J Welsh; M McClelland
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

6.  DNA diversity among clinical isolates of Helicobacter pylori detected by PCR-based RAPD fingerprinting.

Authors:  N Akopyanz; N O Bukanov; T U Westblom; S Kresovich; D E Berg
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

7.  Arbitrary primer polymerase chain reaction, a powerful method to identify Bacillus thuringiensis serovars and strains.

Authors:  R Brousseau; A Saint-Onge; G Préfontaine; L Masson; J Cabana
Journal:  Appl Environ Microbiol       Date:  1993-01       Impact factor: 4.792

8.  Genomic fingerprinting of "Haemophilus somnus" isolates by using a random-amplified polymorphic DNA assay.

Authors:  L E Myers; S V Silva; J D Procunier; P B Little
Journal:  J Clin Microbiol       Date:  1993-03       Impact factor: 5.948

9.  RAPD analysis of Campylobacter isolates: DNA fingerprinting without the need to purify DNA.

Authors:  S Mazurier; A van de Giessen; K Heuvelman; K Wernars
Journal:  Lett Appl Microbiol       Date:  1992-06       Impact factor: 2.858

10.  A comparative study of randomly amplified polymorphic DNA analysis and conventional phage typing for epidemiological studies of Listeria monocytogenes isolates.

Authors:  S I Mazurier; A Audurier; N Marquet-Van der Mee; S Notermans; K Wernars
Journal:  Res Microbiol       Date:  1992-06       Impact factor: 3.992

View more
  3 in total

1.  Are probiotics detectable in human feces after oral uptake by healthy volunteers?

Authors:  Martina Prilassnig; Christoph Wenisch; Florian Daxboeck; Gebhard Feierl
Journal:  Wien Klin Wochenschr       Date:  2007       Impact factor: 1.704

2.  Typing and subtyping of 83 clinical isolates purified from surgically implanted silicone feeding tubes by random amplified polymorphic DNA amplification.

Authors:  Melanie P Dautle; Ricky L Ulrich; Thomas A Hughes
Journal:  J Clin Microbiol       Date:  2002-02       Impact factor: 5.948

Review 3.  Molecular epidemiology of group B streptococcal infections.

Authors:  E Tkacikova; I Mikula; A Dmitriev
Journal:  Folia Microbiol (Praha)       Date:  2004       Impact factor: 2.099

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.