Literature DB >> 9399859

IMGT, the International ImMunoGeneTics database.

M P Lefranc1, V Giudicelli, C Busin, J Bodmer, W Müller, R Bontrop, M Lemaitre, A Malik, D Chaume.   

Abstract

IMGT, the international ImMunoGeneTics database, is an integrated database specialising in Immunoglobulins (Ig), T cell Receptors (TcR) and Major Histocompatibility Complex (MHC) of all vertebrate species, created by Marie-Paule Lefranc, CNRS, Montpellier II University, Montpellier, France (lefranc@ligm.crbm.cnrs-mop.fr). IMGT includes three databases: LIGM-DB (for Ig and TcR), MHC/HLA-DB and PRIMER-DB (the last two in development). IMGT comprises expertly annotated sequences and alignment tables. LIGM-DB contains more than 23 000 Immunoglobulin and T cell Receptor sequences from 78 species. MHC/HLA-DB contains Class I and Class II Human Leucocyte Antigen alignment tables. An IMGT tool, DNAPLOT, developed for Ig, TcR and MHC sequence alignments, is also available. IMGT works in close collaboration with the EMBL database. IMGT goals are to establish a common data access to all immunogenetics data, including nucleotide and protein sequences, oligonucleotide primers, gene maps and other genetic data of Ig, TcR and MHC molecules, and to provide a graphical user friendly data access. IMGT has important implications in medical research (repertoire in autoimmune diseases, AIDS, leukemias, lymphomas), therapeutical approaches (antibody engineering), genome diversity and genome evolution studies. IMGT is freely available at http://imgt.cnusc.fr:8104

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Year:  1998        PMID: 9399859      PMCID: PMC147225          DOI: 10.1093/nar/26.1.297

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  8 in total

Review 1.  Organization of the human T-cell receptor genes.

Authors:  M P Lefranc
Journal:  Eur Cytokine Netw       Date:  1990 Aug-Sep       Impact factor: 2.737

2.  Phosphocholine binding immunoglobulin Fab McPC603. An X-ray diffraction study at 2.7 A.

Authors:  Y Satow; G H Cohen; E A Padlan; D R Davies
Journal:  J Mol Biol       Date:  1986-08-20       Impact factor: 5.469

3.  DNA Data Bank of Japan at work on genome sequence data.

Authors:  Y Tateno; K Fukami-Kobayashi; S Miyazaki; H Sugawara; T Gojobori
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

4.  The EMBL nucleotide sequence database.

Authors:  G Stoesser; M A Moseley; J Sleep; M McGowran; M Garcia-Pastor; P Sterk
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

5.  The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998.

Authors:  A Bairoch; R Apweiler
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

6.  Unique database numbering system for immunogenetic analysis.

Authors:  M P Lefranc
Journal:  Immunol Today       Date:  1997-11

7.  IMGT, the international ImMunoGeneTics database.

Authors:  V Giudicelli; D Chaume; J Bodmer; W Müller; C Busin; S Marsh; R Bontrop; L Marc; A Malik; M P Lefranc
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

8.  Canonical structures for the hypervariable regions of immunoglobulins.

Authors:  C Chothia; A M Lesk
Journal:  J Mol Biol       Date:  1987-08-20       Impact factor: 5.469

  8 in total
  19 in total

1.  IMGT, the international ImMunoGeneTics database.

Authors:  Marie-Paule Lefranc
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

2.  Primary central nervous system lymphomas are derived from germinal-center B cells and show a preferential usage of the V4-34 gene segment.

Authors:  M Montesinos-Rongen; R Küppers; D Schlüter; T Spieker; D Van Roost; C Schaller; G Reifenberger; O D Wiestler; M Deckert-Schlüter
Journal:  Am J Pathol       Date:  1999-12       Impact factor: 4.307

3.  IMGT, the international ImMunoGeneTics database.

Authors:  M Ruiz; V Giudicelli; C Ginestoux; P Stoehr; J Robinson; J Bodmer; S G Marsh; R Bontrop; M Lemaitre; G Lefranc; D Chaume; M P Lefranc
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

4.  Analysis of T-cell receptor BV gene sequences in cattle reveals extensive duplication within the BV9 and BV20 subgroups.

Authors:  E F Houston; T Connelley; K Parsons; N D MacHugh; W I Morrison
Journal:  Immunogenetics       Date:  2005-10-18       Impact factor: 2.846

5.  Temporal Expression of Bim Limits the Development of Agonist-Selected Thymocytes and Skews Their TCRβ Repertoire.

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Journal:  J Immunol       Date:  2016-11-16       Impact factor: 5.422

6.  A semi-invariant Vα10+ T cell antigen receptor defines a population of natural killer T cells with distinct glycolipid antigen-recognition properties.

Authors:  Adam P Uldrich; Onisha Patel; Garth Cameron; Daniel G Pellicci; E Bridie Day; Lucy C Sullivan; Konstantinos Kyparissoudis; Lars Kjer-Nielsen; Julian P Vivian; Benjamin Cao; Andrew G Brooks; Spencer J Williams; Petr Illarionov; Gurdyal S Besra; Stephen J Turner; Steven A Porcelli; James McCluskey; Mark J Smyth; Jamie Rossjohn; Dale I Godfrey
Journal:  Nat Immunol       Date:  2011-06-12       Impact factor: 25.606

7.  The rescue by phage display of human Fabs to gp120 HIV-1 glycoprotein using EBV transformed lymphocytes.

Authors:  E Kempf; E Weiss; P Klein; A Glacet; S Spratt; D Bourel; G Orfanoudakis
Journal:  Mol Biotechnol       Date:  2001-02       Impact factor: 2.695

8.  Automated Antibody De Novo Sequencing and Its Utility in Biopharmaceutical Discovery.

Authors:  K Ilker Sen; Wilfred H Tang; Shruti Nayak; Yong J Kil; Marshall Bern; Berk Ozoglu; Beatrix Ueberheide; Darryl Davis; Christopher Becker
Journal:  J Am Soc Mass Spectrom       Date:  2017-01-19       Impact factor: 3.109

9.  CD3bright signals on γδ T cells identify IL-17A-producing Vγ6Vδ1+ T cells.

Authors:  C Paget; M T Chow; N A Gherardin; P A Beavis; A P Uldrich; H Duret; M Hassane; F Souza-Fonseca-Guimaraes; D A Mogilenko; D Staumont-Sallé; N K Escalante; G R Hill; P Neeson; D S Ritchie; D Dombrowicz; T Mallevaey; F Trottein; G T Belz; D I Godfrey; M J Smyth
Journal:  Immunol Cell Biol       Date:  2014-11-11       Impact factor: 5.126

10.  Sex bias in MHC I-associated shaping of the adaptive immune system.

Authors:  Tilman Schneider-Hohendorf; Dennis Görlich; Paula Savola; Tiina Kelkka; Satu Mustjoki; Catharina C Gross; Geoffrey C Owens; Luisa Klotz; Klaus Dornmair; Heinz Wiendl; Nicholas Schwab
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-12       Impact factor: 11.205

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