Literature DB >> 3097327

Phosphocholine binding immunoglobulin Fab McPC603. An X-ray diffraction study at 2.7 A.

Y Satow, G H Cohen, E A Padlan, D R Davies.   

Abstract

The crystal structure of the Fab of McPC603, a phosphocholine-binding mouse myeloma protein, has been refined at 2.7 A resolution by a combination of restrained least-squares refinement and molecular modeling. The overall structure remains as previously reported, with an elbow bend angle between the variable and constant modules of 133 degrees. Some adjustments have been made in the structure of the loops as a result of the refinement. The hypervariable loops are all visible in the electron density map with the exception of three residues in the first hypervariable loop of the light chain. A sulfate ion occupies the site of binding of the phosphate moiety of phosphocholine.

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Year:  1986        PMID: 3097327     DOI: 10.1016/0022-2836(86)90245-7

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  107 in total

1.  Direct evidence by H/D exchange and ESI-MS for transient unproductive domain interaction in the refolding of an antibody scFv fragment.

Authors:  M Jäger; A Plückthun
Journal:  Protein Sci       Date:  2000-03       Impact factor: 6.725

2.  Elbow flexibility and ligand-induced domain rearrangements in antibody Fab NC6.8: large effects of a small hapten.

Authors:  C A Sotriffer; B M Rode; J M Varga; K R Liedl
Journal:  Biophys J       Date:  2000-08       Impact factor: 4.033

3.  The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core.

Authors:  C Mura; D Cascio; M R Sawaya; D S Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-01       Impact factor: 11.205

4.  A single amino acid substitution in the variable region of the light chain specifically blocks immunoglobulin secretion.

Authors:  J L Dul; Y Argon
Journal:  Proc Natl Acad Sci U S A       Date:  1990-10       Impact factor: 11.205

5.  The three-dimensional structure of a T-cell antigen receptor V alpha V beta heterodimer reveals a novel arrangement of the V beta domain.

Authors:  D Housset; G Mazza; C Grégoire; C Piras; B Malissen; J C Fontecilla-Camps
Journal:  EMBO J       Date:  1997-07-16       Impact factor: 11.598

6.  A missing link in cupredoxins: crystal structure of cucumber stellacyanin at 1.6 A resolution.

Authors:  P J Hart; A M Nersissian; R G Herrmann; R M Nalbandyan; J S Valentine; D Eisenberg
Journal:  Protein Sci       Date:  1996-11       Impact factor: 6.725

Review 7.  Impact of the Protein Data Bank on antineoplastic approvals.

Authors:  John D Westbrook; Rose Soskind; Brian P Hudson; Stephen K Burley
Journal:  Drug Discov Today       Date:  2020-02-14       Impact factor: 7.851

8.  Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA.

Authors:  A Jacobo-Molina; J Ding; R G Nanni; A D Clark; X Lu; C Tantillo; R L Williams; G Kamer; A L Ferris; P Clark
Journal:  Proc Natl Acad Sci U S A       Date:  1993-07-01       Impact factor: 11.205

9.  Contributions of a highly conserved VH/VL hydrogen bonding interaction to scFv folding stability and refolding efficiency.

Authors:  P H Tan; B M Sandmaier; P S Stayton
Journal:  Biophys J       Date:  1998-09       Impact factor: 4.033

10.  Toward a universal inhibitor of retroviral proteases: comparative analysis of the interactions of LP-130 complexed with proteases from HIV-1, FIV, and EIAV.

Authors:  J Kervinen; J Lubkowski; A Zdanov; D Bhatt; B M Dunn; K Y Hui; D J Powell; J Kay; A Wlodawer; A Gustchina
Journal:  Protein Sci       Date:  1998-11       Impact factor: 6.725

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