Literature DB >> 9398512

Structural characterization of the myoglobin active site using infrared crystallography.

J T Sage1, W Jee.   

Abstract

We use polarized IR absorption on single crystals to determine the orientation of carbon monoxide bound at the active site of myoglobin, and conclude that the C-O bond lies approximately 7 degrees from the normal to the mean plane of the heme. This result disagrees with much larger angular displacements reported in structural models derived from X-ray and neutron diffraction measurements. The insensitivity of the IR-derived orientation to changes in pH or crystal packing contrasts with the wide variations in CO orientation among diffraction-based models and suggests that the latter are in error. The small energies required to displace the C-O bond 7 degrees from its energetically preferred upright geometry suggest that distortion of the surrounding protein, rather than the relatively undeformable Fe-C-O unit, is the main steric mechanism inhibiting CO binding to myoglobin. Copyright 1997 Academic Press Limited.

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Year:  1997        PMID: 9398512     DOI: 10.1006/jmbi.1997.1367

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  7 in total

1.  Influence of the heme pocket conformation on the structure and vibrations of the Fe-CO bond in myoglobin: a QM/MM density functional study.

Authors:  C Rovira; B Schulze; M Eichinger; J D Evanseck; M Parrinello
Journal:  Biophys J       Date:  2001-07       Impact factor: 4.033

2.  Temperature-dependent studies of NO recombination to heme and heme proteins.

Authors:  Dan Ionascu; Flaviu Gruia; Xiong Ye; Anchi Yu; Florin Rosca; Chris Beck; Andrey Demidov; John S Olson; Paul M Champion
Journal:  J Am Chem Soc       Date:  2005-12-07       Impact factor: 15.419

3.  Vibrational Dynamics of Biological Molecules: Multi-quantum Contributions.

Authors:  Bogdan M Leu; J Timothy Sage; Marek Z Zgierski; Graeme R A Wyllie; Mary K Ellison; W Robert Scheidt; Wolfgang Sturhahn; E Ercan Alp; Stephen M Durbin
Journal:  J Phys Chem Solids       Date:  2005-12       Impact factor: 3.995

4.  Harmonic and anharmonic dynamics of Fe-CO and Fe-O(2) in heme models.

Authors:  C Rovira; M Parrinello
Journal:  Biophys J       Date:  2000-01       Impact factor: 4.033

5.  Crystal structures of myoglobin-ligand complexes at near-atomic resolution.

Authors:  J Vojtechovský; K Chu; J Berendzen; R M Sweet; I Schlichting
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

6.  Electronic structure and dynamics of nitrosyl porphyrins.

Authors:  W Robert Scheidt; Alexander Barabanschikov; Jeffrey W Pavlik; Nathan J Silvernail; J Timothy Sage
Journal:  Inorg Chem       Date:  2010-07-19       Impact factor: 5.165

7.  Quantitative vibrational dynamics of iron in carbonyl porphyrins.

Authors:  Bogdan M Leu; Nathan J Silvernail; Marek Z Zgierski; Graeme R A Wyllie; Mary K Ellison; W Robert Scheidt; Jiyong Zhao; Wolfgang Sturhahn; E Ercan Alp; J Timothy Sage
Journal:  Biophys J       Date:  2007-03-09       Impact factor: 4.033

  7 in total

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