Literature DB >> 9388188

Understanding enzyme superfamilies. Chemistry As the fundamental determinant in the evolution of new catalytic activities.

P C Babbitt1, J A Gerlt.   

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Year:  1997        PMID: 9388188     DOI: 10.1074/jbc.272.49.30591

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


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  59 in total

1.  One site fits both: a model for the ternary complex of folate + NADPH in R67 dihydrofolate reductase, a D2 symmetric enzyme.

Authors:  E E Howell; U Shukla; S N Hicks; R D Smiley; L A Kuhn; M I Zavodszky
Journal:  J Comput Aided Mol Des       Date:  2001-11       Impact factor: 3.686

2.  Divergence of function in sequence-related groups of Escherichia coli proteins.

Authors:  L A Nahum; M Riley
Journal:  Genome Res       Date:  2001-08       Impact factor: 9.043

3.  Homology modelling and structural analysis of human arylamine N-acetyltransferase NAT1: evidence for the conservation of a cysteine protease catalytic domain and an active-site loop.

Authors:  F Rodrigues-Lima; C Deloménie; G H Goodfellow; D M Grant; J M Dupret
Journal:  Biochem J       Date:  2001-06-01       Impact factor: 3.857

4.  Finding evolutionary relations beyond superfamilies: fold-based superfamilies.

Authors:  Keiko Matsuda; Takaaki Nishioka; Kengo Kinoshita; Takeshi Kawabata; Nobuhiro Go
Journal:  Protein Sci       Date:  2003-10       Impact factor: 6.725

5.  Directed evolution of protein enzymes using nonhomologous random recombination.

Authors:  Joshua A Bittker; Brian V Le; Jane M Liu; David R Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-26       Impact factor: 11.205

6.  Evolution of enzymatic activities of testis-specific short-chain dehydrogenase/reductase in Drosophila.

Authors:  Jianming Zhang; Huyuan Yang; Manyuan Long; Liming Li; Antony M Dean
Journal:  J Mol Evol       Date:  2010-08-31       Impact factor: 2.395

7.  Crystallization, preliminary X-ray diffraction and structure solution of MosA, a dihydrodipicolinate synthase from Sinorhizobium meliloti L5-30.

Authors:  Yvonne A Leduc; Christopher P Phenix; Jennifer Puttick; Kurt Nienaber; David R J Palmer; Louis T J Delbaere
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-12-16

Review 8.  Protein promiscuity and its implications for biotechnology.

Authors:  Irene Nobeli; Angelo D Favia; Janet M Thornton
Journal:  Nat Biotechnol       Date:  2009-02       Impact factor: 54.908

Review 9.  Enzyme (re)design: lessons from natural evolution and computation.

Authors:  John A Gerlt; Patricia C Babbitt
Journal:  Curr Opin Chem Biol       Date:  2009-02-23       Impact factor: 8.822

10.  Using sequence similarity networks for visualization of relationships across diverse protein superfamilies.

Authors:  Holly J Atkinson; John H Morris; Thomas E Ferrin; Patricia C Babbitt
Journal:  PLoS One       Date:  2009-02-03       Impact factor: 3.240

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