Literature DB >> 9385640

1H, 13C, and 15N resonance assignments of Fusarium solani pisi cutinase and preliminary features of the structure in solution.

J J Prompers1, A Groenewegen, R C Van Schaik, H A Pepermans, C W Hilbers.   

Abstract

Essentially complete (96%) sequence-specific assignments were made for the backbone and side-chain 1H, 13C, and 15N resonances of Fusarium solani pisi cutinase, produced as a 214-residue heterologous protein in Escherichia coli, using heteronuclear NMR techniques. Three structural features were noticed during the assignment. (1) The secondary structure in solution corresponds mostly with the structure from X-ray diffraction, suggesting that both structures are globally similar. (2) The HN of Ala32 has a strongly upfield-shifted resonance at 3.97 ppm, indicative of an amide-aromatic hydrogen bond to the indole ring of Trp69 that stabilizes the N-terminal side of the parallel beta-sheet. (3) The NMR data suggest that the residues constituting the oxyanion hole are quite mobile in the free enzyme in solution, in contrast to the existence of a preformed oxyanion hole as observed in the crystal structure. Apparently, cutinase forms its oxyanion hole upon binding of the substrate like true lipases.

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Year:  1997        PMID: 9385640      PMCID: PMC2143586          DOI: 10.1002/pro.5560061111

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  22 in total

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Authors:  W Zhang; W H Gmeiner
Journal:  J Biomol NMR       Date:  1996-05       Impact factor: 2.835

3.  Fusarium solani cutinase is a lipolytic enzyme with a catalytic serine accessible to solvent.

Authors:  C Martinez; P De Geus; M Lauwereys; G Matthyssens; C Cambillau
Journal:  Nature       Date:  1992-04-16       Impact factor: 49.962

4.  Determination of the three-dimensional solution structure of the C-terminal domain of cellobiohydrolase I from Trichoderma reesei. A study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing.

Authors:  J Kraulis; G M Clore; M Nilges; T A Jones; G Pettersson; J Knowles; A M Gronenborn
Journal:  Biochemistry       Date:  1989-09-05       Impact factor: 3.162

5.  1H, 13C, and 15N NMR backbone assignments and secondary structure of human interferon-gamma.

Authors:  S Grzesiek; H Döbeli; R Gentz; G Garotta; A M Labhardt; A Bax
Journal:  Biochemistry       Date:  1992-09-08       Impact factor: 3.162

6.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

7.  Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

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8.  Catalysis at the interface: the anatomy of a conformational change in a triglyceride lipase.

Authors:  U Derewenda; A M Brzozowski; D M Lawson; Z S Derewenda
Journal:  Biochemistry       Date:  1992-02-11       Impact factor: 3.162

9.  A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin.

Authors:  M Ikura; L E Kay; A Bax
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10.  Assignment of asparagine-44 side-chain primary amide 1H NMR resonances and the peptide amide N1H resonance of glycine-37 in basic pancreatic trypsin inhibitor.

Authors:  E Tüchsen; C Woodward
Journal:  Biochemistry       Date:  1987-04-07       Impact factor: 3.162

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  6 in total

1.  Comparative NMR study on the impact of point mutations on protein stability of Pseudomonas mendocina lipase.

Authors:  Nathalie Sibille; Adrien Favier; Ana I Azuaga; Grant Ganshaw; Richard Bott; Alexandre M J J Bonvin; Rolf Boelens; Nico A J van Nuland
Journal:  Protein Sci       Date:  2006-07-05       Impact factor: 6.725

2.  Alternative SAIL-Trp for robust aromatic signal assignment and determination of the χ(2) conformation by intra-residue NOEs.

Authors:  Yohei Miyanoiri; Mitsuhiro Takeda; JunGoo Jee; Akira M Ono; Kosuke Okuma; Tsutomu Terauchi; Masatsune Kainosho
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Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

4.  Triple-resonance methods for complete resonance assignment of aromatic protons and directly bound heteronuclei in histidine and tryptophan residues.

Authors:  Frank Löhr; Vladimir V Rogov; Meichen Shi; Frank Bernhard; Volker Dötsch
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5.  Consequences of breaking the Asp-His hydrogen bond of the catalytic triad: effects on the structure and dynamics of the serine esterase cutinase.

Authors:  E Y Lau; T C Bruice
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

6.  Thermodynamic and structural investigation of the specific SDS binding of Humicola insolens cutinase.

Authors:  David Kold; Zbigniew Dauter; Anne K Laustsen; Andrzej M Brzozowski; Johan P Turkenburg; Anders D Nielsen; Heidi Koldsø; Evamaria Petersen; Birgit Schiøtt; Leonardo De Maria; Keith S Wilson; Allan Svendsen; Reinhard Wimmer
Journal:  Protein Sci       Date:  2014-06-16       Impact factor: 6.725

  6 in total

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