Literature DB >> 9369472

Structural comparison of the enzymatically active and inactive forms of delta crystallin and the role of histidine 91.

M Abu-Abed1, M A Turner, F Vallée, A Simpson, C Slingsby, P L Howell.   

Abstract

The major soluble protein component of avian and reptilian eye lenses, delta crystallin, is highly homologous to the urea cycle enzyme, argininosuccinate lyase (ASL). In duck lenses there are two highly homologous delta crystallins, termed delta I and delta II, that are 94% identical in amino acid sequence. While delta II crystallin has been shown to exhibit ASL activity in vitro, delta I crystallin is inactive. The X-ray structure of a His to Asn mutant of duck delta II crystallin (H91N) has been determined to 2.5 A resolution using the molecular replacement technique. The overall fold of the protein is similar to other members of the superfamily to which this protein belongs, with the active site located in a cleft between three different monomers of the tetrameric protein. A reexamination of the kinetic properties of the H91N mutant reveals that the mutant has 10% wild-type activity. The Vmax of the mutant protein is identical to that of the wild-type protein, but a 10-fold increase in the Michaelis constant is seen, suggesting that His 91 is involved in binding the substrate. In an effort to determine the reasons for the loss of enzymatic activity in delta I crystallin, a structural comparison of the H91N mutant with the enzymatically inactive turkey delta I crystallin has been performed. This study revealed a remarkable similarity in the overall structures of the two proteins. Three regions of secondary structure do differ significantly between the two models; these include the N-terminal tail, a loop containing residues 76-91, and a cis versus trans peptide linkage at residue Thr 322. The cis to trans peptide variation appears to be an interspecies difference between turkey and duck and is therefore not directly involved in the loss of enzymatic activity. All the residues implicated in the catalytic mechanism are conserved in both the active and inactive proteins, and given the linearity of the relationship between the enzymatic activity of duck delta I/delta II heterotetramers and their delta II content (Piatigorsky & Horwitz, 1996), it is evident from the structure that only one of the three domains that contributes to the active site is responsible for the loss of activity in the delta I protein. Given the structural differences found in domain 1 (N-terminal tail and 76-91 loop), we postulate that these differences are responsible for the loss of catalytic activity in the delta I crystallin protein and that the delta I protein is inactive because it no longer binds the substrate.

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Year:  1997        PMID: 9369472     DOI: 10.1021/bi971407s

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  Crystallization and preliminary X-ray analysis of argininosuccinate lyase from Streptococcus mutans.

Authors:  Yan-Li Cao; Gui-Lan Li; Kai-Tuo Wang; Hong-Yin Zhang; Lan-Fen Li
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-05-25

2.  Domain exchange experiments in duck delta-crystallins: functional and evolutionary implications.

Authors:  L M Sampaleanu; A R Davidson; C Graham; G J Wistow; P L Howell
Journal:  Protein Sci       Date:  1999-03       Impact factor: 6.725

3.  The effect of N-terminal truncation on double-dimer assembly of goose delta-crystallin.

Authors:  Hwei-Jen Lee; Young-Hsang Lai; Su-Ying Wu; Yu-Hou Chen
Journal:  Biochem J       Date:  2005-12-15       Impact factor: 3.857

4.  Structural studies of duck delta2 crystallin mutants provide insight into the role of Thr161 and the 280s loop in catalysis.

Authors:  Liliana M Sampaleanu; Penelope W Codding; Yuri D Lobsanov; May Tsai; G David Smith; Cathy Horvatin; P Lynne Howell
Journal:  Biochem J       Date:  2004-12-01       Impact factor: 3.857

Review 5.  Intragenic complementation at the argininosuccinate lyase locus: reconstruction of the active site.

Authors:  P L Howell; M A Turner; J Christodoulou; D C Walker; H J Craig; L R Simard; L Ploder; R R McInnes
Journal:  J Inherit Metab Dis       Date:  1998       Impact factor: 4.982

6.  Chemical mechanism of the endogenous argininosuccinate lyase activity of duck lens delta2-crystallin.

Authors:  C Y Wu; H J Lee; S H Wu; S T Chen; S H Chiou; G G Chang
Journal:  Biochem J       Date:  1998-07-15       Impact factor: 3.857

7.  Substrate and product complexes of Escherichia coli adenylosuccinate lyase provide new insights into the enzymatic mechanism.

Authors:  May Tsai; Jason Koo; Patrick Yip; Roberta F Colman; Mark L Segall; P Lynne Howell
Journal:  J Mol Biol       Date:  2007-05-04       Impact factor: 5.469

8.  eXtraembryonic ENdoderm (XEN) stem cells produce factors that activate heart formation.

Authors:  Kemar Brown; Michael Xavier Doss; Stephanie Legros; Jérôme Artus; Anna-Katerina Hadjantonakis; Ann C Foley
Journal:  PLoS One       Date:  2010-10-20       Impact factor: 3.240

9.  The interaction of Glu294 at the subunit interface is important for the activity and stability of goose delta-crystallin.

Authors:  Chih-Wei Huang; Yu-Hou Chen; Ya-Huei Chen; Yun-Chi Tsai; Hwei-Jen Lee
Journal:  Mol Vis       Date:  2009-11-14       Impact factor: 2.367

10.  Lys-315 at the Interfaces of Diagonal Subunits of δ-Crystallin Plays a Critical Role in the Reversibility of Folding and Subunit Assembly.

Authors:  Chih-Wei Huang; Hui-Chen Lin; Chi-Yuan Chou; Wei-Chuo Kao; Wei-Yuan Chou; Hwei-Jen Lee
Journal:  PLoS One       Date:  2016-01-05       Impact factor: 3.240

  10 in total

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