Literature DB >> 10091655

Domain exchange experiments in duck delta-crystallins: functional and evolutionary implications.

L M Sampaleanu1, A R Davidson, C Graham, G J Wistow, P L Howell.   

Abstract

Delta-crystallin, the major soluble protein component of the avian and reptilian eye lens, is homologous to the urea cycle enzyme argininosuccinate lyase (ASL). In duck lenses there are two delta crystallins, denoted delta1 and delta2. Duck delta2 is both a major structural protein of the lens and also the duck orthologue of ASL, an example of gene recruitment. Although 94% identical to delta2/ASL in the amino acid sequence, delta1 is enzymatically inactive. A series of hybrid proteins have been constructed to assess the role of each structural domain in the enzymatic mechanism. Five chimeras--221, 122, 121, 211, and 112, where the three numbers correspond to the three structural domains and the value of 1 or 2 represents the protein of origin, delta1 or delta2, respectively--were constructed and thermodynamically and kinetically analyzed. The kinetic analysis indicates that only domain 1 is crucial for restoring ASL activity to delta1 crystallin, and that amino acid substitutions in domain 2 may play a role in substrate binding. These results confirm the hypothesis that only one domain, domain 1, is responsible for the loss of catalytic activity in delta1. The thermodynamic characterization of human ASL (hASL) and duck delta1 and delta2 indicate that delta crystallins are slightly less stable than hASL, with the delta1 being the least stable. The deltaGs of unfolding are 57.25, 63.13, and 70.71 kcal mol(-1) for delta1, delta2, and hASL, respectively. This result was unexpected, and we speculate that delta crystallins have adapted to their structural role by adopting a slightly less stable conformation that might allow for enhanced protein-protein and protein-solvent interactions.

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Year:  1999        PMID: 10091655      PMCID: PMC2144284          DOI: 10.1110/ps.8.3.529

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  51 in total

1.  Sequence analysis of pigeon delta-crystallin gene and its deduced primary structure. Comparison of avian delta-crystallins with and without endogenous argininosuccinate lyase activity.

Authors:  C W Lin; S H Chiou
Journal:  FEBS Lett       Date:  1992-10-26       Impact factor: 4.124

2.  Two delta-crystallin polypeptides are derived from a cloned delta 1-crystallin cDNA.

Authors:  E F Wawrousek; J M Nickerson; J Piatigorsky
Journal:  FEBS Lett       Date:  1986-09-15       Impact factor: 4.124

3.  The accessible surface area and stability of oligomeric proteins.

Authors:  S Miller; A M Lesk; J Janin; C Chothia
Journal:  Nature       Date:  1987 Aug 27-Sep 2       Impact factor: 49.962

4.  Recruitment of enzymes as lens structural proteins.

Authors:  G Wistow; J Piatigorsky
Journal:  Science       Date:  1987-06-19       Impact factor: 47.728

5.  Structural and functional relationships between fumarase and aspartase. Nucleotide sequences of the fumarase (fumC) and aspartase (aspA) genes of Escherichia coli K12.

Authors:  S A Woods; J S Miles; R E Roberts; J R Guest
Journal:  Biochem J       Date:  1986-07-15       Impact factor: 3.857

6.  The enzyme lactate dehydrogenase as a structural protein in avian and crocodilian lenses.

Authors:  G J Wistow; J W Mulders; W W de Jong
Journal:  Nature       Date:  1987 Apr 9-15       Impact factor: 49.962

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Authors:  L S Yeh; A Elzanowski; L T Hunt; W C Barker
Journal:  Comp Biochem Physiol B       Date:  1988

8.  Improvements in the numerical analysis of thermodynamic data from biomolecular complexes.

Authors:  C A Royer
Journal:  Anal Biochem       Date:  1993-04       Impact factor: 3.365

9.  Folding of bacterial luciferase involves a non-native heterodimeric intermediate in equilibrium with the native enzyme and the unfolded subunits.

Authors:  A C Clark; J F Sinclair; T O Baldwin
Journal:  J Biol Chem       Date:  1993-05-25       Impact factor: 5.157

10.  Inactivation of the endogenous argininosuccinate lyase activity of duck delta-crystallin by modification of an essential histidine residue with diethyl pyrocarbonate.

Authors:  H J Lee; S H Chiou; G G Chang
Journal:  Biochem J       Date:  1993-07-15       Impact factor: 3.857

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  1 in total

1.  Structural studies of duck delta2 crystallin mutants provide insight into the role of Thr161 and the 280s loop in catalysis.

Authors:  Liliana M Sampaleanu; Penelope W Codding; Yuri D Lobsanov; May Tsai; G David Smith; Cathy Horvatin; P Lynne Howell
Journal:  Biochem J       Date:  2004-12-01       Impact factor: 3.857

  1 in total

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