Literature DB >> 9364766

Satellite DNA repeat sequence variation is low in three species of burying beetles in the genus Nicrophorus (Coleoptera: Silphidae).

L M King1, M P Cummings.   

Abstract

Three satellite DNA families were identified in three species of burying beetles, Nicrophorus orbicollis, N. marginatus, and N. americanus. Southern hybridization and nucleotide sequence analysis of individual randomly cloned repeats shows that these satellite DNA families are highly abundant in the genome, are composed of unique repeats, and are species-specific. The repeats do not have identifiable core elements or substructures that are similar in all three families, and most interspecific sequence similarity is confined to homopolymeric runs of A and T. Satellite DNA from N. marginatus and N. americanus show single-base-pair indels among repeats, but single-nucleotide substitutions characterize most of the repeat variability. Although the repeat units are of similar lengths (342, 350, and 354 bp) and A + T composition (65%, 71%, and 71%, respectively), the average nucleotide divergence among sequenced repeats is very low (0.18%, 1.22%, and 0.71%, respectively). Transition/transversion ratios from the consensus sequence are 0.20, 0.69, and 0.70, respectively.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9364766     DOI: 10.1093/oxfordjournals.molbev.a025718

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  5 in total

Review 1.  Structural and functional liaisons between transposable elements and satellite DNAs.

Authors:  Nevenka Meštrović; Brankica Mravinac; Martina Pavlek; Tanja Vojvoda-Zeljko; Eva Šatović; Miroslav Plohl
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

2.  W-enriched satellite sequence in the Indian meal moth, Plodia interpunctella (Lepidoptera, Pyralidae).

Authors:  Martina Dalíková; Magda Zrzavá; Svatava Kubíčková; František Marec
Journal:  Chromosome Res       Date:  2017-05-12       Impact factor: 5.239

3.  Chromosomal study of a lamprey (Lampetra zanandreai Vladykov, 1955) (Petromyzonida: Petromyzontiformes): conventional and FISH analysis.

Authors:  Vincenzo Caputo; Massimo Giovannotti; Paola Nisi Cerioni; Andrea Splendiani; James Tagliavini; Ettore Olmo
Journal:  Chromosome Res       Date:  2011-03-25       Impact factor: 5.239

4.  Molecular evolution of the pDo500 satellite DNA family in Dolichopoda cave crickets (Rhaphidophoridae).

Authors:  Lene Martinsen; Federica Venanzetti; Arild Johnsen; Valerio Sbordoni; Lutz Bachmann
Journal:  BMC Evol Biol       Date:  2009-12-28       Impact factor: 3.260

5.  Molecular characterization and chromosomal distribution of a species-specific transcribed centromeric satellite repeat from the olive fruit fly, Bactrocera oleae.

Authors:  Konstantina T Tsoumani; Elena Drosopoulou; Penelope Mavragani-Tsipidou; Kostas D Mathiopoulos
Journal:  PLoS One       Date:  2013-11-14       Impact factor: 3.240

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.