Literature DB >> 9315857

Identification of conformational substates involved in nitric oxide binding to ferric and ferrous myoglobin through difference Fourier transform infrared spectroscopy (FTIR).

L M Miller1, A J Pedraza, M R Chance.   

Abstract

Hemeproteins play an important role in the signaling processes mediated by nitric oxide (NO). For example, the production of NO by nitric oxide synthase, the activation of guanylate cyclase by binding NO, and the scavenging of NO by hemoglobin, myoglobin, and cytochrome c oxidase all occur through unique mechanisms of interaction between NO and hemeproteins. Unlike carbon monoxide (CO) and oxygen (O2), which have been studied extensively, the reactions of NO with ferric and ferrous hemeproteins are not as well characterized. In this work, NO binding to myoglobin is studied using cryogenic optical spectroscopy and Fourier transform infrared spectroscopy (FTIR) in order to characterize the ligand-bound and photoproduct states involved in the interaction of NO with the heme iron and the distal pocket of the protein. For ferrous nitrosyl myoglobin (MbIINO), optical spectroscopy is used to show that the ligand-bound state can be converted to >95% stable photoproduct below 10 K. The Soret peak of the photoproduct is red-shifted by 4 nm relative to deoxy-myoglobin (Mb), similar to previous results for carbonmonoxy- (MbCO) and oxy-myoglobin (MbO2) (Miller et al., 1996). MbIINO completely rebinds by 35 K, indicating that the rebinding barrier for NO is lower than MbCO, consistent with room temperature picosecond kinetic measurements. For ferric nitrosyl myoglobin (MbIIINO), we find that the photoproduct yield at cryogenic temperatures is less than unity and dependent on the distal pocket residue. Native MbIIINO has a lower photoproduct yield than the mutant, MbIII(H64L)NO, where the distal histidine is replaced by leucine. The rebinding rates for the native and mutant species are similar to each other and to MbIINO. By using FTIR difference spectroscopy (photolyzed/unphotolyzed) of isotopically labeled ferrous nitrosyl myoglobin (MbIINO), the NO stretching frequencies in both the ligand-bound states and photoproduct states are determined. Two ligand-bound conformational states (1607 and 1613 cm-1) and two photoproduct conformational states (1852 and 1857 cm-1) are observed for MbIINO. This is the first direct observation of photolyzed NO in the distal pocket of myoglobin. The ligand-bound frequencies are consistent with a bent MbIINO moiety, where the unpaired pi*(NO) electron remains localized on NO, causing nu(N-O) to be approximately 300 cm-1 lower than MbIIINO. Similar to MbO2, we suggest that Nepsilon of the distal histidine is protonated, forming a hydrogen bond to the NO ligand. For native MbIIINO, a single ligand-bound conformational state with respect to nu(N-O) is observed at 1927 cm-1. This frequency decreases to 1904 cm-1 for the mutant, MbIII(H64L)NO, contrary to the increase of the carbon monoxide (CO) stretching frequency in the isoelectronic MbII(H64L)CO mutant versus native MbCO. For linear MbIIINO, we suggest that backbonding from the unpaired pi*(NO) electron to iron results in an increased positive charge on the NO ligand, Fe(delta-)-NO(delta+). This can be facilitated by tautomerism of the distal histidine, leaving Nepsilon of the imidazole ring unprotonated and able to accept positive charge from the Fe(delta-)-NO(delta+) moiety, resulting in a higher bond order (and a 23 cm-1 shift to higher frequency) for native MbIIINO versus MbIII(H64L)NO, where this interaction is absent. These different interactions between the distal histidine and the ferrous versus ferric species illustrate potential ways the protein can stabilize the bound ligand and demonstrate the versatile nature by which NO can bind to hemeproteins.

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Year:  1997        PMID: 9315857     DOI: 10.1021/bi962744o

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Modification of the heme electronic structure induced by complex formation with nitric oxide and the atomic backbone dynamics at room temperature.

Authors:  T A Romanova; P O Krasnov; P V Avramov
Journal:  Dokl Biochem Biophys       Date:  2001 Sep-Oct       Impact factor: 0.788

2.  Spectroscopic characterization of mononitrosyl complexes in heme--nonheme diiron centers within the myoglobin scaffold (Fe(B)Mbs): relevance to denitrifying NO reductase.

Authors:  Takahiro Hayashi; Kyle D Miner; Natasha Yeung; Ying-Wu Lin; Yi Lu; Pierre Moënne-Loccoz
Journal:  Biochemistry       Date:  2011-06-14       Impact factor: 3.162

3.  Temperature-dependent studies of NO recombination to heme and heme proteins.

Authors:  Dan Ionascu; Flaviu Gruia; Xiong Ye; Anchi Yu; Florin Rosca; Chris Beck; Andrey Demidov; John S Olson; Paul M Champion
Journal:  J Am Chem Soc       Date:  2005-12-07       Impact factor: 15.419

Review 4.  Spectroscopic characterization of heme iron-nitrosyl species and their role in NO reductase mechanisms in diiron proteins.

Authors:  Pierre Moënne-Loccoz
Journal:  Nat Prod Rep       Date:  2007-03-23       Impact factor: 13.423

5.  New light on NO bonding in Fe(III) heme proteins from resonance Raman spectroscopy and DFT modeling.

Authors:  Alexandra V Soldatova; Mohammed Ibrahim; John S Olson; Roman S Czernuszewicz; Thomas G Spiro
Journal:  J Am Chem Soc       Date:  2010-04-07       Impact factor: 15.419

6.  Nuclear inelastic scattering and Mössbauer spectroscopy as local probes for ligand binding modes and electronic properties in proteins: vibrational behavior of a ferriheme center inside a β-barrel protein.

Authors:  Beate Moeser; Adam Janoschka; Juliusz A Wolny; Hauke Paulsen; Igor Filippov; Robert E Berry; Hongjun Zhang; Aleksandr I Chumakov; F Ann Walker; Volker Schünemann
Journal:  J Am Chem Soc       Date:  2012-02-27       Impact factor: 15.419

7.  Fourier transform infrared characterization of a CuB-nitrosyl complex in cytochrome ba3 from Thermus thermophilus: relevance to NO reductase activity in heme-copper terminal oxidases.

Authors:  Takahiro Hayashi; I-Jin Lin; Ying Chen; James A Fee; Pierre Moënne-Loccoz
Journal:  J Am Chem Soc       Date:  2007-11-13       Impact factor: 15.419

8.  Accommodation of two diatomic molecules in cytochrome bo: insights into NO reductase activity in terminal oxidases.

Authors:  Takahiro Hayashi; Myat T Lin; Krithika Ganesan; Ying Chen; James A Fee; Robert B Gennis; Pierre Moënne-Loccoz
Journal:  Biochemistry       Date:  2009-02-10       Impact factor: 3.162

9.  Nitric oxide dynamics in truncated hemoglobin: docking sites, migration pathways, and vibrational spectroscopy from molecular dynamics simulations.

Authors:  Sabyashachi Mishra; Markus Meuwly
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

10.  Synchrotron-Based FTIR Spectromicroscopy: Cytotoxicity and Heating Considerations.

Authors:  H-Y N Holman; M C Martin; W R McKinney
Journal:  J Biol Phys       Date:  2003-06       Impact factor: 1.365

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