Literature DB >> 9298285

Modeling temperature compensation in chemical and biological oscillators.

P Ruoff1, L Rensing, R Kommedal, S Mohsenzadeh.   

Abstract

All physicochemical and biological oscillators maintain a balance between destabilizing reactions (as, for example, intrinsic autocatalytic or amplifying reactions) and stabilizing processes. These two groups of processes tend to influence the period in opposite directions and may lead to temperature compensation whenever their overall influence balances. This principle of "antagonistic balance" has been tested for several chemical and biological oscillators. The Goodwin negative feedback oscillator appears of particular interest for modeling the circadian clocks in Neurospora and Drosophila and their temperature compensation. Remarkably, the Goodwin oscillator not only gives qualitative, correct phase response curves for temperature steps and temperature pulses, but also simulates the temperature behavior of Neurospora frq and Drosophila per mutants almost quantitatively. The Goodwin oscillator predicts that circadian periods are strongly dependent on the turnover of the clock mRNA or clock protein. A more rapid turnover of clock mRNA or clock protein results, in short, a slower turnover in longer period lengths.

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Mesh:

Year:  1997        PMID: 9298285     DOI: 10.3109/07420529709001471

Source DB:  PubMed          Journal:  Chronobiol Int        ISSN: 0742-0528            Impact factor:   2.877


  18 in total

1.  Epistatic and synergistic interactions between circadian clock mutations in Neurospora crassa.

Authors:  L W Morgan; J F Feldman
Journal:  Genetics       Date:  2001-10       Impact factor: 4.562

2.  A simple model of circadian rhythms based on dimerization and proteolysis of PER and TIM.

Authors:  J J Tyson; C I Hong; C D Thron; B Novak
Journal:  Biophys J       Date:  2008-11-21       Impact factor: 4.033

3.  A proposal for robust temperature compensation of circadian rhythms.

Authors:  Christian I Hong; Emery D Conrad; John J Tyson
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-17       Impact factor: 11.205

4.  An allosteric model of circadian KaiC phosphorylation.

Authors:  Jeroen S van Zon; David K Lubensky; Pim R H Altena; Pieter Rein ten Wolde
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-25       Impact factor: 11.205

5.  Modeling temperature entrainment of circadian clocks using the Arrhenius equation and a reconstructed model from Chlamydomonas reinhardtii.

Authors:  Ines Heiland; Christian Bodenstein; Thomas Hinze; Olga Weisheit; Oliver Ebenhoeh; Maria Mittag; Stefan Schuster
Journal:  J Biol Phys       Date:  2012-03-04       Impact factor: 1.365

6.  Temperature-Robust Neural Function from Activity-Dependent Ion Channel Regulation.

Authors:  Timothy O'Leary; Eve Marder
Journal:  Curr Biol       Date:  2016-10-13       Impact factor: 10.834

7.  Natural allelic variation in the temperature-compensation mechanisms of the Arabidopsis thaliana circadian clock.

Authors:  Kieron D Edwards; James R Lynn; Péter Gyula; Ferenc Nagy; Andrew J Millar
Journal:  Genetics       Date:  2005-03-21       Impact factor: 4.562

8.  The relationship between FRQ-protein stability and temperature compensation in the Neurospora circadian clock.

Authors:  Peter Ruoff; Jennifer J Loros; Jay C Dunlap
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-28       Impact factor: 11.205

9.  The molecular basis of temperature compensation in the Arabidopsis circadian clock.

Authors:  Peter D Gould; James C W Locke; Camille Larue; Megan M Southern; Seth J Davis; Shigeru Hanano; Richard Moyle; Raechel Milich; Joanna Putterill; Andrew J Millar; Anthony Hall
Journal:  Plant Cell       Date:  2006-04-14       Impact factor: 11.277

10.  A role for casein kinase 2 in the mechanism underlying circadian temperature compensation.

Authors:  Arun Mehra; Mi Shi; Christopher L Baker; Hildur V Colot; Jennifer J Loros; Jay C Dunlap
Journal:  Cell       Date:  2009-05-15       Impact factor: 41.582

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