Literature DB >> 9288930

Biochemical characterisation of ornithine carbamoyltransferase from Pyrococcus furiosus.

C Legrain1, V Villeret, M Roovers, D Gigot, O Dideberg, A Piérard, N Glansdorff.   

Abstract

Ornithine carbamoyltransferase (OTCase) was purified to homogeneity from the hyperthermophilic archaeon Pyrococcus furiosus. The enzyme is a 400 +/- 20-kDa polymer of a 35-kDa subunit, in keeping with the corresponding gene sequence [Roovers, M., Hethke, C., Legrain, C., Thomm, M. & Glansdorff, N. (1997) Isolation of the gene encoding Pyrococcus furiosus ornithine cabamoyltransferase and study of its expression profile in vivo and in vitro, Eur. J. Biochem. 247, 1038-1045]. In contrast with the dodecameric catabolic OTCase of Pseudomonas aeruginosa, P. furiosus OTCase exhibits no substrate cooperativity. In keeping with other data discussed in the text, this suggests that the enzyme serves an anabolic function. Half-life estimates for the purified enzyme ranged over 21-65 min at 100 degrees C according to the experimental conditions and reached several hours in the presence of ornithine and phosphate. The stability was not markedly influenced by the protein concentration. Whereas comparative examination of OTCase sequences did not point to any outstanding feature possibly related to thermophily, modelling the enzyme on the X-ray structure of P. aeruginosa OTCase (constituted by four trimers assembled in a tetrahedral manner) suggests that the molecule is stabilized, at least in part, by a set of hydrophobic interactions at the interfaces between the trimers. The comparison between P. aeruginosa and P. furiosus OTCases suggests that two different properties, allostery and thermostability, have been engineered starting from a similar quaternary structure of high internal symmetry. Recombinant P. furiosus OTCase synthesised by Escherichia coli proved less stable than the native enzyme. In Saccharomyces cerevisiae, however, an enzyme apparently identical to the native one could be obtained.

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Year:  1997        PMID: 9288930     DOI: 10.1111/j.1432-1033.1997.01046.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  10 in total

1.  Experimental evolution of enzyme temperature activity profile: selection in vivo and characterization of low-temperature-adapted mutants of Pyrococcus furiosus ornithine carbamoyltransferase.

Authors:  M Roovers; R Sanchez; C Legrain; N Glansdorff
Journal:  J Bacteriol       Date:  2001-02       Impact factor: 3.490

2.  Purification and characterization of a cobalt-activated carboxypeptidase from the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  T C Cheng; V Ramakrishnan; S I Chan
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

3.  DNA microarray analysis of the hyperthermophilic archaeon Pyrococcus furiosus: evidence for anNew type of sulfur-reducing enzyme complex.

Authors:  G J Schut; J Zhou; M W Adams
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

4.  The crystal structure of Pyrococcus furiosus ornithine carbamoyltransferase reveals a key role for oligomerization in enzyme stability at extremely high temperatures.

Authors:  V Villeret; B Clantin; C Tricot; C Legrain; M Roovers; V Stalon; N Glansdorff; J Van Beeumen
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-17       Impact factor: 11.205

5.  Metabolic enzymes from psychrophilic bacteria: challenge of adaptation to low temperatures in ornithine carbamoyltransferase from Moritella abyssi.

Authors:  Ying Xu; Georges Feller; Charles Gerday; Nicolas Glansdorff
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

6.  New insight into the transcarbamylase family: the structure of putrescine transcarbamylase, a key catalyst for fermentative utilization of agmatine.

Authors:  Luis Mariano Polo; Fernando Gil-Ortiz; Angel Cantín; Vicente Rubio
Journal:  PLoS One       Date:  2012-02-20       Impact factor: 3.240

Review 7.  From Genome to Structure and Back Again: A Family Portrait of the Transcarbamylases.

Authors:  Dashuang Shi; Norma M Allewell; Mendel Tuchman
Journal:  Int J Mol Sci       Date:  2015-08-12       Impact factor: 5.923

8.  The Proteome and Lipidome of Thermococcus kodakarensis across the Stationary Phase.

Authors:  Emma J Gagen; Marcos Y Yoshinaga; Franka Garcia Prado; Kai-Uwe Hinrichs; Michael Thomm
Journal:  Archaea       Date:  2016-05-04       Impact factor: 3.273

9.  Comparative structural insight into the unidirectional catalysis of ornithine carbamoyltransferases from Psychrobacter sp. PAMC 21119.

Authors:  Hackwon Do; Dieu Linh Nguyen; Chang Woo Lee; Min Ju Lee; Hoejung Oh; Jisub Hwang; Se Jong Han; Sung Gu Lee; Jun Hyuck Lee
Journal:  PLoS One       Date:  2022-09-23       Impact factor: 3.752

10.  Identifying reaction modules in metabolic pathways: bioinformatic deduction and experimental validation of a new putative route in purine catabolism.

Authors:  Matthieu Barba; Raphaël Dutoit; Christianne Legrain; Bernard Labedan
Journal:  BMC Syst Biol       Date:  2013-10-05
  10 in total

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