Literature DB >> 9219340

Applications of the long and accurate polymerase chain reaction method in yeast molecular biology: direct sequencing of the amplified DNA and its introduction into yeast.

Y Takita1, M Takahara, S Nogami, Y Anraku, Y Ohya.   

Abstract

A DNA fragment longer than 10 kb can be amplified by the long and accurate polymerase chain reaction (LA-PCR) method. We demonstrate here applications of this technique in molecular biological studies of Saccharomyces cerevisiae. We have shown that DNA fragments amplified by LA-PCR can be directly used as a template in the chain-termination sequencing protocol, making it possible to quickly identify the DNA insert of yeast genomic library clones. We have also shown that the amplified yeast DNA can easily be introduced into yeast by co-transformation with linearized vector DNA. Overlapping DNA between the amplified yeast fragment and the vector must be more than 20 bp long in order to obtain 90% or more correct recombinant plasmids. These results suggest that simple amplification of yeast clones by LA-PCR can replace the previous procedures of yeast clone recovery, consisting of transformation of Escherichia coli, propagation of plasmids in E. coli and preparation of plasmid DNA.

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Year:  1997        PMID: 9219340     DOI: 10.1002/(SICI)1097-0061(19970630)13:8<763::AID-YEA135>3.0.CO;2-0

Source DB:  PubMed          Journal:  Yeast        ISSN: 0749-503X            Impact factor:   3.239


  9 in total

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Authors:  Hiroshi Qadota; Donald G Moerman; Guy M Benian
Journal:  J Biol Chem       Date:  2012-07-03       Impact factor: 5.157

2.  A ku70 null mutant improves gene targeting frequency in the fungal pathogen Verticillium dahliae.

Authors:  Xiliang Qi; Xiaofeng Su; Huiming Guo; Juncang Qi; Hongmei Cheng
Journal:  World J Microbiol Biotechnol       Date:  2015-12       Impact factor: 3.312

3.  Efficient and versatile transformation systems in entomopathogenic fungus Lecanicillium species.

Authors:  Kei-ichi Ishidoh; Hiroshi Kinoshita; Fumio Ihara; Takuya Nihira
Journal:  Curr Genet       Date:  2013-07-14       Impact factor: 3.886

4.  The akuB(KU80) mutant deficient for nonhomologous end joining is a powerful tool for analyzing pathogenicity in Aspergillus fumigatus.

Authors:  Márcia Eliana da Silva Ferreira; Marcia R V Z Kress; Marcela Savoldi; Maria Helena S Goldman; Albert Härtl; Thorsten Heinekamp; Axel A Brakhage; Gustavo H Goldman
Journal:  Eukaryot Cell       Date:  2006-01

5.  Genetic analysis suggests a surface of PAT-4 (ILK) that interacts with UNC-112 (kindlin).

Authors:  Hiroshi Qadota; Annie McPherson; Rachel Corbitt; Evan Kelton Dackowski; Yohei Matsunaga; Andres F Oberhauser; Guy M Benian
Journal:  G3 (Bethesda)       Date:  2022-07-06       Impact factor: 3.542

Review 6.  Considering Strain Variation and Non-Type Strains for Yeast Metabolic Engineering Applications.

Authors:  Xiunan Yi; Hal S Alper
Journal:  Life (Basel)       Date:  2022-03-30

7.  Highly efficient gene replacements in Neurospora strains deficient for nonhomologous end-joining.

Authors:  Yuuko Ninomiya; Keiichiro Suzuki; Chizu Ishii; Hirokazu Inoue
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-06       Impact factor: 11.205

Review 8.  An approach for exploring interaction between two proteins in vivo.

Authors:  Hiroshi Qadota; Guy M Benian
Journal:  Front Physiol       Date:  2014-04-29       Impact factor: 4.566

Review 9.  Unique molecular mechanisms for maintenance and alteration of genetic information in the budding yeast Saccharomyces cerevisiae.

Authors:  Sayoko Ito-Harashima; Takashi Yagi
Journal:  Genes Environ       Date:  2017-12-01
  9 in total

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