Literature DB >> 26475327

A ku70 null mutant improves gene targeting frequency in the fungal pathogen Verticillium dahliae.

Xiliang Qi, Xiaofeng Su, Huiming Guo, Juncang Qi, Hongmei Cheng.   

Abstract

To overcome the challenges met with gene deletion in the plant pathogen Verticillium dahliae, a mutant strain with impaired non-homologous end joining DNA repair was generated to improve targeted gene replacement frequencies. A V. dahliae 991 ΔVdku70 null mutant strain was generated using Agrobacterium tumefaciens-mediated transformation. Despite having impaired non-homologous end joining DNA repair function, the ΔVdku70 strain exhibited normal growth, reproduction capability, and pathogenicity when compared with the wild-type strain. When the ΔVdku70 strain was used to delete 2-oxoglutarate dehydrogenase E2, ferric reductase transmembrane component 3 precursor, and ferric reductase transmembrane component 6 genes, gene replacement frequencies ranged between 22.8 and 34.7% compared with 0.3 and 0.5 % in the wild-type strain. The ΔVdku70 strain will be a valuable tool to generate deletion strains when studying factors that underlie virulence and pathogenesis in this filamentous fungus.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26475327     DOI: 10.1007/s11274-015-1907-1

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  37 in total

1.  Biochemical evidence for Ku-independent backup pathways of NHEJ.

Authors:  Huichen Wang; Ange Ronel Perrault; Yoshihiko Takeda; Wei Qin; Hongyan Wang; George Iliakis
Journal:  Nucleic Acids Res       Date:  2003-09-15       Impact factor: 16.971

2.  53BP1 contributes to survival of cells irradiated with X-ray during G1 without Ku70 or Artemis.

Authors:  Kuniyoshi Iwabuchi; Mitsumasa Hashimoto; Tadashi Matsui; Takayuki Kurihara; Hiroko Shimizu; Noritaka Adachi; Masamichi Ishiai; Ken-ichi Yamamoto; Hiroshi Tauchi; Minoru Takata; Hideki Koyama; Takayasu Date
Journal:  Genes Cells       Date:  2006-08       Impact factor: 1.891

3.  Nonhomologous chromosomal integration of foreign DNA is completely dependent on MUS-53 (human Lig4 homolog) in Neurospora.

Authors:  Kazuma Ishibashi; Keiichiro Suzuki; Yoshinori Ando; Chihiro Takakura; Hirokazu Inoue
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-26       Impact factor: 11.205

4.  Highly efficient generation of signal transduction knockout mutants using a fungal strain deficient in the mammalian ku70 ortholog.

Authors:  Stefanie Pöggeler; Ulrich Kück
Journal:  Gene       Date:  2006-04-30       Impact factor: 3.688

5.  Identification of Saccharomyces cerevisiae DNA ligase IV: involvement in DNA double-strand break repair.

Authors:  S H Teo; S P Jackson
Journal:  EMBO J       Date:  1997-08-01       Impact factor: 11.598

6.  Applications of the long and accurate polymerase chain reaction method in yeast molecular biology: direct sequencing of the amplified DNA and its introduction into yeast.

Authors:  Y Takita; M Takahara; S Nogami; Y Anraku; Y Ohya
Journal:  Yeast       Date:  1997-06-30       Impact factor: 3.239

7.  Improvements to gene deletion in the fungal pathogen Cryptococcus neoformans: absence of Ku proteins increases homologous recombination, and co-transformation of independent DNA molecules allows rapid complementation of deletion phenotypes.

Authors:  Chelsey L Goins; Kimberly J Gerik; Jennifer K Lodge
Journal:  Fungal Genet Biol       Date:  2006-05-22       Impact factor: 3.495

Review 8.  Botrytis cinerea virulence factors: new insights into a necrotrophic and polyphageous pathogen.

Authors:  Mathias Choquer; Elisabeth Fournier; Caroline Kunz; Caroline Levis; Jean-Marc Pradier; Adeline Simon; Muriel Viaud
Journal:  FEMS Microbiol Lett       Date:  2007-12       Impact factor: 2.742

9.  Genetic and physiological regulation of non-homologous end-joining in mammalian cells.

Authors:  Akira Tachibana
Journal:  Adv Biophys       Date:  2004

10.  Construction of an hdfA Penicillium chrysogenum strain impaired in non-homologous end-joining and analysis of its potential for functional analysis studies.

Authors:  I S I Snoek; Z A van der Krogt; H Touw; R Kerkman; J T Pronk; R A L Bovenberg; M A van den Berg; J M Daran
Journal:  Fungal Genet Biol       Date:  2009-03-06       Impact factor: 3.495

View more
  6 in total

1.  PaCYP78A9, a Cytochrome P450, Regulates Fruit Size in Sweet Cherry (Prunus avium L.).

Authors:  Xiliang Qi; Congli Liu; Lulu Song; Yuhong Li; Ming Li
Journal:  Front Plant Sci       Date:  2017-12-05       Impact factor: 5.753

2.  VdPLP, A Patatin-Like Phospholipase in Verticillium dahliae, Is Involved in Cell Wall Integrity and Required for Pathogenicity.

Authors:  Xiliang Qi; Xiaokang Li; Huiming Guo; Ning Guo; Hongmei Cheng
Journal:  Genes (Basel)       Date:  2018-03-13       Impact factor: 4.096

3.  UvHOG1 is important for hyphal growth and stress responses in the rice false smut fungus Ustilaginoidea virens.

Authors:  Dawei Zheng; Yi Wang; Yu Han; Jin-Rong Xu; Chenfang Wang
Journal:  Sci Rep       Date:  2016-04-20       Impact factor: 4.379

Review 4.  An Overview of CRISPR-Based Tools and Their Improvements: New Opportunities in Understanding Plant-Pathogen Interactions for Better Crop Protection.

Authors:  Abdellah Barakate; Jennifer Stephens
Journal:  Front Plant Sci       Date:  2016-06-01       Impact factor: 5.753

5.  Protoplast transformation as a potential platform for exploring gene function in Verticillium dahliae.

Authors:  Latifur Rehman; Xiaofeng Su; Huiming Guo; Xiliang Qi; Hongmei Cheng
Journal:  BMC Biotechnol       Date:  2016-07-26       Impact factor: 2.563

6.  Synthesis of the Hydroxamate Siderophore N α-Methylcoprogen B in Scedosporium apiospermum Is Mediated by sidD Ortholog and Is Required for Virulence.

Authors:  Yohann Le Govic; Vladimir Havlíček; Javier Capilla; Dominika Luptáková; Dayana Dumas; Nicolas Papon; Solène Le Gal; Jean-Philippe Bouchara; Patrick Vandeputte
Journal:  Front Cell Infect Microbiol       Date:  2020-10-28       Impact factor: 5.293

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.