Literature DB >> 9209069

Conservation of the Escherichia coli dnaX programmed ribosomal frameshift signal in Salmonella typhimurium.

A Blinkova1, M F Burkart, T D Owens, J R Walker.   

Abstract

Escherichia coli DNA polymerase III subunits tau and gamma are produced from one gene, dnaX, by a programmed ribosomal frameshift which generates the C terminal of gamma within the tau reading frame. To help evaluate the role of the dispensable gamma, the distribution of tau and gamma homologs in several other species and the sequence of the Salmonella typhimurium dnaX were determined. All four enterobacteria tested produce tau and gamma homologs. S. typhimurium dnaX is 83% identical to E. coli dnaX, but all four components of the frameshift signal are 100% conserved.

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Year:  1997        PMID: 9209069      PMCID: PMC179275          DOI: 10.1128/jb.179.13.4438-4442.1997

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  40 in total

1.  Mechanism of the sliding beta-clamp of DNA polymerase III holoenzyme.

Authors:  P T Stukenberg; P S Studwell-Vaughan; M O'Donnell
Journal:  J Biol Chem       Date:  1991-06-15       Impact factor: 5.157

Review 2.  D-E-A-D protein family of putative RNA helicases.

Authors:  S R Schmid; P Linder
Journal:  Mol Microbiol       Date:  1992-02       Impact factor: 3.501

3.  Analysis of the ATPase subassembly which initiates processive DNA synthesis by DNA polymerase III holoenzyme.

Authors:  R Onrust; P T Stukenberg; M O'Donnell
Journal:  J Biol Chem       Date:  1991-11-15       Impact factor: 5.157

4.  The gamma subunit of DNA polymerase III holoenzyme of Escherichia coli is produced by ribosomal frameshifting.

Authors:  A M Flower; C S McHenry
Journal:  Proc Natl Acad Sci U S A       Date:  1990-05       Impact factor: 11.205

5.  Replisome assembly reveals the basis for asymmetric function in leading and lagging strand replication.

Authors:  A Yuzhakov; J Turner; M O'Donnell
Journal:  Cell       Date:  1996-09-20       Impact factor: 41.582

6.  Total reconstitution of DNA polymerase III holoenzyme reveals dual accessory protein clamps.

Authors:  M O'Donnell; P S Studwell
Journal:  J Biol Chem       Date:  1990-01-15       Impact factor: 5.157

7.  Translational frameshifting generates the gamma subunit of DNA polymerase III holoenzyme.

Authors:  Z Tsuchihashi; A Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  1990-04       Impact factor: 11.205

8.  Programmed ribosomal frameshifting generates the Escherichia coli DNA polymerase III gamma subunit from within the tau subunit reading frame.

Authors:  A L Blinkowa; J R Walker
Journal:  Nucleic Acids Res       Date:  1990-04-11       Impact factor: 16.971

9.  Sequence requirements for efficient translational frameshifting in the Escherichia coli dnaX gene and the role of an unstable interaction between tRNA(Lys) and an AAG lysine codon.

Authors:  Z Tsuchihashi; P O Brown
Journal:  Genes Dev       Date:  1992-03       Impact factor: 11.361

10.  Transcriptional organization of the Escherichia coli dnaX gene.

Authors:  A M Flower; C S McHenry
Journal:  J Mol Biol       Date:  1991-08-05       Impact factor: 5.469

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  4 in total

Review 1.  Architecture and conservation of the bacterial DNA replication machinery, an underexploited drug target.

Authors:  Andrew Robinson; Rebecca J Causer; Nicholas E Dixon
Journal:  Curr Drug Targets       Date:  2012-03       Impact factor: 3.465

Review 2.  A Replisome's journey through the bacterial chromosome.

Authors:  Thomas R Beattie; Rodrigo Reyes-Lamothe
Journal:  Front Microbiol       Date:  2015-06-05       Impact factor: 5.640

3.  Identification of the nature of reading frame transitions observed in prokaryotic genomes.

Authors:  Ivan Antonov; Arthur Coakley; John F Atkins; Pavel V Baranov; Mark Borodovsky
Journal:  Nucleic Acids Res       Date:  2013-05-06       Impact factor: 16.971

4.  FSDB: a frameshift signal database.

Authors:  Sanghoon Moon; Yanga Byun; Kyungsook Han
Journal:  Comput Biol Chem       Date:  2007-05-17       Impact factor: 2.877

  4 in total

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