Literature DB >> 9174369

Can a two-state MWC allosteric model explain hemoglobin kinetics?

E R Henry1, C M Jones, J Hofrichter, W A Eaton.   

Abstract

We have analyzed the nanosecond-millisecond kinetics of ligand binding and conformational changes in hemoglobin. The kinetics were determined from measurements of precise time-resolved optical spectra following nanosecond photodissociation of the heme-carbon monoxide complex. To fit the data, it was necessary to extend the two-state allosteric model of Monod, Wyman, and Changeux (MWC) to include geminate ligand rebinding and nonexponential tertiary relaxation within the R quaternary structure. Considerable simplification of the model is obtained by using a linear free energy relation for the rates of quaternary transitions, and by incorporating concepts from recent studies on the physics of geminate rebinding and conformational changes in myoglobin. The model, described by 85 coupled differential equations, quantitatively explains a demanding set of complex kinetic data. Moreover, with the same set of kinetic parameters it simultaneously fits the equilibrium data on ligand binding and the distribution of ligation states. The present results, together with those from single-crystal oxygen binding studies, indicate that the two-state MWC allosteric model has survived its most critical tests.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9174369     DOI: 10.1021/bi9619177

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  24 in total

1.  Multiple geminate ligand recombinations in human hemoglobin.

Authors:  R M Esquerra; R A Goldbeck; S H Reaney; A M Batchelder; Y Wen; J W Lewis; D S Kliger
Journal:  Biophys J       Date:  2000-06       Impact factor: 4.033

2.  New insights into the allosteric mechanism of human hemoglobin from molecular dynamics simulations.

Authors:  Liliane Mouawad; David Perahia; Charles H Robert; Christophe Guilbert
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

Review 3.  Searching for "downhill scenarios" in protein folding.

Authors:  W A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

4.  The role of hydration on the mechanism of allosteric regulation: in situ measurements of the oxygen-linked kinetics of water binding to hemoglobin.

Authors:  Andrés G Salvay; J Raúl Grigera; Marcio F Colombo
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

5.  New insights into allosteric mechanisms from trapping unstable protein conformations in silica gels.

Authors:  Cristiano Viappiani; Stefano Bettati; Stefano Bruno; Luca Ronda; Stefania Abbruzzetti; Andrea Mozzarelli; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-22       Impact factor: 11.205

6.  Structural dynamics of ligand diffusion in the protein matrix: A study on a new myoglobin mutant Y(B10) Q(E7) R(E10).

Authors:  M Brunori; F Cutruzzolà; C Savino; C Travaglini-Allocatelli; B Vallone; Q H Gibson
Journal:  Biophys J       Date:  1999-03       Impact factor: 4.033

7.  Circular dichroism spectroscopy of tertiary and quaternary conformations of human hemoglobin entrapped in wet silica gels.

Authors:  Luca Ronda; Stefano Bruno; Cristiano Viappiani; Stefania Abbruzzetti; Andrea Mozzarelli; Kenneth C Lowe; Stefano Bettati
Journal:  Protein Sci       Date:  2006-07-05       Impact factor: 6.725

8.  An optical signal correlated with the allosteric transition in Scapharca inaequivalvis HbI.

Authors:  Jeffry C Nichols; William E Royer; Quentin H Gibson
Journal:  Biochemistry       Date:  2006-12-19       Impact factor: 3.162

9.  Kinetic response of a photoperturbed allosteric protein.

Authors:  Brigitte Buchli; Steven A Waldauer; Reto Walser; Mateusz L Donten; Rolf Pfister; Nicolas Blöchliger; Sandra Steiner; Amedeo Caflisch; Oliver Zerbe; Peter Hamm
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-01       Impact factor: 11.205

10.  Statistical mechanics of Monod-Wyman-Changeux (MWC) models.

Authors:  Sarah Marzen; Hernan G Garcia; Rob Phillips
Journal:  J Mol Biol       Date:  2013-03-14       Impact factor: 5.469

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.