Literature DB >> 9129834

The interaction of quinone and detergent with reaction centers of purple bacteria. I. Slow quinone exchange between reaction center micelles and pure detergent micelles.

V P Shinkarev1, C A Wraight.   

Abstract

The kinetics of light-induced electron transfer in reaction centers (RCs) from the purple photosynthetic bacterium Rhodobacter sphaeroides were studied in the presence of the detergent lauryldimethylamine-N-oxide (LDAO). After the light-induced electron transfer from the primary donor (P) to the acceptor quinone complex, the dark re-reduction of P+ reflects recombination from the reduced acceptor quinones, QA- or QB-. The secondary quinone, QB, which is loosely bound to the RC, determines the rate of this process. Electron transfer to QB slows down the return of the electron to P+, giving rise to a slow phase of the recovery kinetics with time tau P approximately 1 s, whereas charge recombination in RCs lacking QB generates a fast phase with time tau AP approximately 0.1 s. The amount of quinone bound to RC micelles can be reduced by increasing the detergent concentration. The characteristic time of the slow component of P+ dark relaxation, observed at low quinone content per RC micelle (at high detergent concentration), is about 1.2-1.5 s, in sharp contrast to expectations from previous models, according to which the time of the slow component should approach the time of the fast component (about 0.1 s) when the quinone concentration approaches zero. To account for this large discrepancy, a new quantitative approach has been developed to analyze the kinetics of electron transfer in isolated RCs with the following key features: 1) The exchange of quinone between different micelles (RC and detergent micelles) occurs more slowly than electron transfer from QB- to P+; 2) The exchange of quinone between the detergent "phase" and the QB binding site within the same RC micelle is much faster than electron transfer between QA- and P+; 3) The time of the slow component of P+ dark relaxation is determined by (n) > or = 1, the average number of quinones in RC micelles, calculated only for those RC micelles that have at least one quinone per RC (in excess of QA). An analytical function is derived that relates the time of the slow component of P+ relaxation, tau P, and the relative amplitude of the slow phase. This provides a useful means of determining the true equilibrium constant of electron transfer between QA and QB (LAB), and the association equilibrium constant of quinone binding at the QB site (KQ+). We found that LAB = 22 +/- 3 and KQ = 0.6 +/- 0.2 at pH 7.5. The analysis shows that saturation of the QB binding site in detergent-solubilized RCs is difficult to achieve with hydrophobic quinones. This has important implications for the interpretation of apparent dependencies of QB function on environmental parameters (e.g. pH) and on mutational alterations. The model accounts for the effects of detergent and quinone concentration on electron transfer in the acceptor quinone complex, and the conclusions are of general significance for the study of quinone-binding membrane proteins in detergent solutions.

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Year:  1997        PMID: 9129834      PMCID: PMC1184426          DOI: 10.1016/S0006-3495(97)78875-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  14 in total

1.  Comparison of reaction centers from Rhodobacter sphaeroides and Rhodopseudomonas viridis: overall architecture and protein-pigment interactions.

Authors:  O el-Kabbani; C H Chang; D Tiede; J Norris; M Schiffer
Journal:  Biochemistry       Date:  1991-06-04       Impact factor: 3.162

2.  A Fourier method for the analysis of exponential decay curves.

Authors:  S W Provencher
Journal:  Biophys J       Date:  1976-01       Impact factor: 4.033

3.  The association of different detergents with the photosynthetic reaction center protein of Rhodobacter sphaeroides R26 and the effects on its photochemistry.

Authors:  P Gast; P W Hemelrijk; H J Van Gorkom; A J Hoff
Journal:  Eur J Biochem       Date:  1996-08-01

4.  Structure of the reaction center from Rhodobacter sphaeroides R-26: the protein subunits.

Authors:  J P Allen; G Feher; T O Yeates; H Komiya; D C Rees
Journal:  Proc Natl Acad Sci U S A       Date:  1987-09       Impact factor: 11.205

5.  Crystallographic refinement at 2.3 A resolution and refined model of the photosynthetic reaction centre from Rhodopseudomonas viridis.

Authors:  J Deisenhofer; O Epp; I Sinning; H Michel
Journal:  J Mol Biol       Date:  1995-02-24       Impact factor: 5.469

6.  Determination of the number of detergent molecules associated with the reaction center protein isolated from the photosynthetic bacterium Rhodopseudomonas viridis. Effects of the amphiphilic molecule 1,2,3-heptanetriol.

Authors:  P Gast; P Hemelrijk; A J Hoff
Journal:  FEBS Lett       Date:  1994-01-03       Impact factor: 4.124

Review 7.  Proton transfer in reaction centers from photosynthetic bacteria.

Authors:  M Y Okamura; G Feher
Journal:  Annu Rev Biochem       Date:  1992       Impact factor: 23.643

8.  Structure of the detergent phase and protein-detergent interactions in crystals of the wild-type (strain Y) Rhodobacter sphaeroides photochemical reaction center.

Authors:  M Roth; B Arnoux; A Ducruix; F Reiss-Husson
Journal:  Biochemistry       Date:  1991-10-01       Impact factor: 3.162

9.  Electron transfer in reaction centers of Rhodopseudomonas sphaeroides. I. Determination of the charge recombination pathway of D+QAQ(-)B and free energy and kinetic relations between Q(-)AQB and QAQ(-)B.

Authors:  D Kleinfeld; M Y Okamura; G Feher
Journal:  Biochim Biophys Acta       Date:  1984-07-27

Review 10.  Nobel lecture. The photosynthetic reaction centre from the purple bacterium Rhodopseudomonas viridis.

Authors:  J Deisenhofer; H Michel
Journal:  EMBO J       Date:  1989-08       Impact factor: 11.598

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  13 in total

1.  Cumulant analysis of charge recombination kinetics in bacterial reaction centers reconstituted into lipid vesicles.

Authors:  G Palazzo; A Mallardi; M Giustini; D Berti; G Venturoli
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

2.  Self-regulation phenomena applied to bacterial reaction centers: 2. Nonequilibrium adiabatic potential: dark and light conformations revisited.

Authors:  Alexander O Goushcha; Anthony J Manzo; Gary W Scott; Leonid N Christophorov; Peter P Knox; Yuri M Barabash; Marina T Kapoustina; Natalja M Berezetska; Valery N Kharkyanen
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

3.  Kinetics of H+ ion binding by the P+QA-state of bacterial photosynthetic reaction centers: rate limitation within the protein.

Authors:  P Maróti; C A Wraight
Journal:  Biophys J       Date:  1997-07       Impact factor: 4.033

4.  Semiquinone oscillations as a tool for investigating the ubiquinone binding to photosynthetic reaction centers.

Authors:  Fulvio Ciriaco; Rocco Roberto Tangorra; Alessandra Antonucci; Livia Giotta; Angela Agostiano; Massimo Trotta; Francesco Milano
Journal:  Eur Biophys J       Date:  2015-02-17       Impact factor: 1.733

5.  Colin A. Wraight, 1945-2014.

Authors:  Roger C Prince; Donald R Ort
Journal:  Photosynth Res       Date:  2015-07-23       Impact factor: 3.573

Review 6.  Time-resolved infrared spectroscopy in the study of photosynthetic systems.

Authors:  Alberto Mezzetti; Winfried Leibl
Journal:  Photosynth Res       Date:  2016-09-27       Impact factor: 3.573

7.  Changes in plasma membrane fluidity of corn (Zea mays L.) roots after Brij 58 treatment.

Authors:  M Behzadipour; M Kluge; S Lüthje
Journal:  Protoplasma       Date:  2001       Impact factor: 3.356

8.  Investigation of ubiquinol formation in isolated photosynthetic reaction centers by rapid-scan Fourier transform IR spectroscopy.

Authors:  Alberto Mezzetti; Winfried Leibl
Journal:  Eur Biophys J       Date:  2005-05-21       Impact factor: 1.733

9.  Conformational differences between the methoxy groups of QA and QB site ubisemiquinones in bacterial reaction centers: a key role for methoxy group orientation in modulating ubiquinone redox potential.

Authors:  Alexander T Taguchi; Patrick J O'Malley; Colin A Wraight; Sergei A Dikanov
Journal:  Biochemistry       Date:  2013-06-24       Impact factor: 3.162

10.  Equilibration kinetics in isolated and membrane-bound photosynthetic reaction centers upon illumination: a method to determine the photoexcitation rate.

Authors:  Anthony J Manzo; Alexander O Goushcha; Yuri M Barabash; Valery N Kharkyanen; Gary W Scott
Journal:  Photosynth Res       Date:  2009-07-04       Impact factor: 3.573

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