Literature DB >> 9108177

Rapid isolation of yeast plasmids as native chromatin.

C Martinez-Campa1, N A Kent, J Mellor.   

Abstract

Many regions of chromatin are subject to dynamic changes. We have developed a rapid method for isolation of small chromatin templates from yeast which will facilitate biochemical analysis of chromatin composition. Using the PHO5 promoter we show that templates prepared from cells grown in inducing or repressing conditions show native chromatin structures. This method may be widely applicable as the chromatin structures at a centromere, at ARS1 and at part of the lacZ region on two other plasmids are preserved after chromatin isolation.

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Year:  1997        PMID: 9108177      PMCID: PMC146668          DOI: 10.1093/nar/25.9.1872

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  10 in total

Review 1.  Remodeling chromatin structures for transcription: what happens to the histones?

Authors:  D J Steger; J L Workman
Journal:  Bioessays       Date:  1996-11       Impact factor: 4.345

2.  Isolation of an episomal yeast gene and replication origin as chromatin.

Authors:  D S Pederson; M Venkatesan; F Thoma; R T Simpson
Journal:  Proc Natl Acad Sci U S A       Date:  1986-10       Impact factor: 11.205

3.  Statistical positioning of nucleosomes by specific protein-binding to an upstream activating sequence in yeast.

Authors:  M J Fedor; N F Lue; R D Kornberg
Journal:  J Mol Biol       Date:  1988-11-05       Impact factor: 5.469

4.  Chromatin structure snap-shots: rapid nuclease digestion of chromatin in yeast.

Authors:  N A Kent; J Mellor
Journal:  Nucleic Acids Res       Date:  1995-09-25       Impact factor: 16.971

5.  Chromatin analysis in yeast using NP-40 permeabilised sphaeroplasts.

Authors:  N A Kent; L E Bird; J Mellor
Journal:  Nucleic Acids Res       Date:  1993-09-25       Impact factor: 16.971

6.  Nuclease digestion of circular TRP1ARS1 chromatin reveals positioned nucleosomes separated by nuclease-sensitive regions.

Authors:  F Thoma; L W Bergman; R T Simpson
Journal:  J Mol Biol       Date:  1984-08-25       Impact factor: 5.469

7.  Multifunctional yeast high-copy-number shuttle vectors.

Authors:  T W Christianson; R S Sikorski; M Dante; J H Shero; P Hieter
Journal:  Gene       Date:  1992-01-02       Impact factor: 3.688

8.  Nuclease hypersensitive regions with adjacent positioned nucleosomes mark the gene boundaries of the PHO5/PHO3 locus in yeast.

Authors:  A Almer; W Hörz
Journal:  EMBO J       Date:  1986-10       Impact factor: 11.598

9.  A nucleosome precludes binding of the transcription factor Pho4 in vivo to a critical target site in the PHO5 promoter.

Authors:  U Venter; J Svaren; J Schmitz; A Schmid; W Hörz
Journal:  EMBO J       Date:  1994-10-17       Impact factor: 11.598

10.  Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements.

Authors:  A Almer; H Rudolph; A Hinnen; W Hörz
Journal:  EMBO J       Date:  1986-10       Impact factor: 11.598

  10 in total
  2 in total

1.  Isolation of nuclei for chromatin analysis in fission yeast.

Authors:  J A Mason; J Mellor
Journal:  Nucleic Acids Res       Date:  1997-11-15       Impact factor: 16.971

2.  Cyclin E uses Cdc6 as a chromatin-associated receptor required for DNA replication.

Authors:  L Furstenthal; B K Kaiser; C Swanson; P K Jackson
Journal:  J Cell Biol       Date:  2001-03-19       Impact factor: 10.539

  2 in total

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