Literature DB >> 9032081

The structure of an energy-coupling protein from bacteria, IIBcellobiose, reveals similarity to eukaryotic protein tyrosine phosphatases.

R L van Montfort1, T Pijning, K H Kalk, J Reizer, M H Saier, M M Thunnissen, G T Robillard, B W Dijkstra.   

Abstract

BACKGROUND: . The bacterial phosphoenolpyruvate-dependent phosphotransferase system (PTS) mediates the energy-driven uptake of carbohydrates and their concomitant phosphorylation. In addition, the PTS is intimately involved in the regulation of a variety of metabolic and transcriptional processes in the bacterium. The multiprotein PTS consists of a membrane channel and at least four cytoplasmic proteins or protein domains that sequentially transfer a phosphoryl group from phosphoenolpyruvate to the transported carbohydrate. Determination of the three-dimensional structure of the IIB enzymes within the multiprotein complex would provide insights into the mechanisms by which they promote efficient transport by the membrane channel IIC protein and phosphorylate the transported carbohydrate on the inside of the cell.
RESULTS: . The crystal structure of the IIB enzyme specific for cellobiose, IIBcellobiose (molecular weight 11.4 kDa), has been determined to a resolution of 1.8 and refined to an R factor of 18.7% (Rfree of 24. 1%). The enzyme consists of a single four-stranded parallel beta sheet flanked by helices on both sides. The phosphorylation site (Cys 10) is located at the C-terminal end of the first beta strand. No positively charged residues, which could assist in phosphoryl-transfer, can be found in or near the active site. The fold of IIBcellobiose is remarkably similar to that of the mammalian low molecular weight protein tyrosine phosphatases.
CONCLUSIONS: . A comparison between IIBcellobiose and the structurally similar low molecular weight protein tyrosine phosphatases provides insight into the mechanism of the phosphoryltransfer reactions in which IIBcellobiose is involved. The differences in tertiary structure and active-site composition between IIBcellobiose and the glucose-specific IIBglucose give a structural explanation why the carbo-hydrate-specific components of different families cannot complement each other.

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Year:  1997        PMID: 9032081     DOI: 10.1016/s0969-2126(97)00180-9

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  13 in total

1.  A test case for structure-based functional assignment: the 1.2 A crystal structure of the yjgF gene product from Escherichia coli.

Authors:  K Volz
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

Review 2.  Vectorial metabolism and the evolution of transport systems.

Authors:  M H Saier
Journal:  J Bacteriol       Date:  2000-09       Impact factor: 3.490

3.  Discovery of a significant, nontopological preference for antiparallel alignment of helices with parallel regions in sheets.

Authors:  Brandon M Hespenheide; Leslie A Kuhn
Journal:  Protein Sci       Date:  2003-05       Impact factor: 6.725

4.  Solution structure of the IIAChitobiose-HPr complex of the N,N'-diacetylchitobiose branch of the Escherichia coli phosphotransferase system.

Authors:  Young-Sang Jung; Mengli Cai; G Marius Clore
Journal:  J Biol Chem       Date:  2012-05-16       Impact factor: 5.157

Review 5.  How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria.

Authors:  Josef Deutscher; Christof Francke; Pieter W Postma
Journal:  Microbiol Mol Biol Rev       Date:  2006-12       Impact factor: 11.056

6.  Solution structure of the IIAChitobiose-IIBChitobiose complex of the N,N'-diacetylchitobiose branch of the Escherichia coli phosphotransferase system.

Authors:  Young-Sang Jung; Mengli Cai; G Marius Clore
Journal:  J Biol Chem       Date:  2009-12-03       Impact factor: 5.157

Review 7.  Structure, dynamics and biophysics of the cytoplasmic protein-protein complexes of the bacterial phosphoenolpyruvate: sugar phosphotransferase system.

Authors:  G Marius Clore; Vincenzo Venditti
Journal:  Trends Biochem Sci       Date:  2013-09-19       Impact factor: 13.807

8.  NMR structure of the enzyme GatB of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system and its interaction with GatA.

Authors:  Laurent Volpon; Christopher R Young; Allan Matte; Kalle Gehring
Journal:  Protein Sci       Date:  2006-09-08       Impact factor: 6.725

Review 9.  Structural insight into the PTS sugar transporter EIIC.

Authors:  Jason G McCoy; Elena J Levin; Ming Zhou
Journal:  Biochim Biophys Acta       Date:  2014-03-20

10.  Solution NMR structures of productive and non-productive complexes between the A and B domains of the cytoplasmic subunit of the mannose transporter of the Escherichia coli phosphotransferase system.

Authors:  Jun Hu; Kaifeng Hu; David C Williams; Michal E Komlosh; Mengli Cai; G Marius Clore
Journal:  J Biol Chem       Date:  2008-02-11       Impact factor: 5.157

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