Literature DB >> 9029798

Estimating the age of the common ancestor of a sample of DNA sequences.

Y X Fu1, W H Li.   

Abstract

We present a simple Monte Carlo method for estimating the age of the most recent common ancestor (MRCA) of a sample of DNA sequences. We show that Templeton's (1993) estimator of the age of the MRCA based on the maximum number of nucleotide differences between two sequences in a sample is inaccurate, and we demonstrate the new method by reanalyzing a sample of DNA sequences from human Y chromosomes and a sample of human Alu sequences.

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Year:  1997        PMID: 9029798     DOI: 10.1093/oxfordjournals.molbev.a025753

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  24 in total

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2.  A comparison of two popular statistical methods for estimating the time to most recent common ancestor (TMRCA) from a sample of DNA sequences.

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Review 5.  Computer simulations: tools for population and evolutionary genetics.

Authors:  Sean Hoban; Giorgio Bertorelle; Oscar E Gaggiotti
Journal:  Nat Rev Genet       Date:  2012-01-10       Impact factor: 53.242

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Journal:  Genetics       Date:  2005-01-16       Impact factor: 4.562

7.  Bayesian estimation of recent migration rates after a spatial expansion.

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8.  A multidimensional approach for detecting species patterns in Malagasy vertebrates.

Authors:  Anne D Yoder; Link E Olson; Carol Hanley; Kellie L Heckman; Rodin Rasoloarison; Amy L Russell; Julie Ranivo; Voahangy Soarimalala; K Praveen Karanth; Achille P Raselimanana; Steven M Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-25       Impact factor: 11.205

9.  Likelihoods from summary statistics: recent divergence between species.

Authors:  Scotland C Leman; Yuguo Chen; Jason E Stajich; Mohamed A F Noor; Marcy K Uyenoyama
Journal:  Genetics       Date:  2005-09-02       Impact factor: 4.562

10.  Approximate bayesian computation without summary statistics: the case of admixture.

Authors:  Vitor C Sousa; Marielle Fritz; Mark A Beaumont; Lounès Chikhi
Journal:  Genetics       Date:  2009-02-02       Impact factor: 4.562

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