Literature DB >> 9023962

Novel group within the kingdom Crenarchaeota from boreal forest soil.

G Jurgens1, K Lindström, A Saano.   

Abstract

We report here the results of phylogenetic analysis of archaeal 16S rRNA gene sequences amplified by PCR with Archaea-specific primers with mixed-population DNA extracted directly from forest soil used as a template. Nucleotide signature and phylogenetic analyses show that the sequences obtained belong to the domain Archaea and form a new cluster. Its phylogenetic position suggests that sequences are from a previously undescribed terrestrial group within the kingdom Crenarchaeota.

Mesh：

Substances：

Year:  1997        PMID： 9023962      PMCID： PMC168374          DOI： 10.1128/aem.63.2.803-805.1997

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  14 in total

1.  Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction.

Authors:  K D Bruce; W D Hiorns; J L Hobman; A M Osborn; P Strike; D A Ritchie
Journal:  Appl Environ Microbiol       Date:  1992-10       Impact factor: 4.792

2.  Novel major archaebacterial group from marine plankton.

Authors:  J A Fuhrman; K McCallum; A A Davis
Journal:  Nature       Date:  1992-03-12       Impact factor: 49.962

3.  Occurrence of novel groups of the domain Bacteria as revealed by analysis of genetic material isolated from an Australian terrestrial environment.

Authors:  W Liesack; E Stackebrandt
Journal:  J Bacteriol       Date:  1992-08       Impact factor: 3.490

4.  Archaea in coastal marine environments.

Authors:  E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

Review 5.  Bacterial evolution.

Authors:  C R Woese
Journal:  Microbiol Rev       Date:  1987-06

Review 6.  Phylogenetic identification and in situ detection of individual microbial cells without cultivation.

Authors:  R I Amann; W Ludwig; K H Schleifer
Journal:  Microbiol Rev       Date:  1995-03

7.  Recovery and phylogenetic analysis of novel archaeal rRNA sequences from a deep-sea deposit feeder.

Authors:  J O McInerney; M Wilkinson; J W Patching; T M Embley; R Powell
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

8.  Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences.

Authors:  S M Barns; C F Delwiche; J D Palmer; N R Pace
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-20       Impact factor: 11.205

9.  Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells.

Authors:  S J Giovannoni; E F DeLong; G J Olsen; N R Pace
Journal:  J Bacteriol       Date:  1988-02       Impact factor: 3.490

10.  The Ribosomal Database Project.

Authors:  B L Maidak; N Larsen; M J McCaughey; R Overbeek; G J Olsen; K Fogel; J Blandy; C R Woese
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971
View more
  62 in total

1.  Population structure and phylogenetic characterization of marine benthic Archaea in deep-sea sediments.

Authors:  C Vetriani; H W Jannasch; B J MacGregor; D A Stahl; A L Reysenbach
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

2.  A few cosmopolitan phylotypes dominate planktonic archaeal assemblages in widely different oceanic provinces.

Authors:  R Massana; E F DeLong; C Pedrós-Alió
Journal:  Appl Environ Microbiol       Date:  2000-05       Impact factor: 4.792

3.  Abundance and diversity of Archaea in heavy-metal-contaminated soils.

Authors:  R A Sandaa; O Enger; V Torsvik
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

4.  Molecular and culture-based analyses of prokaryotic communities from an agricultural soil and the burrows and casts of the earthworm Lumbricus rubellus.

Authors:  Michelle A Furlong; David R Singleton; David C Coleman; William B Whitman
Journal:  Appl Environ Microbiol       Date:  2002-03       Impact factor: 4.792

5.  Natural communities of novel archaea and bacteria growing in cold sulfurous springs with a string-of-pearls-like morphology.

Authors:  C Rudolph; G Wanner; R Huber
Journal:  Appl Environ Microbiol       Date:  2001-05       Impact factor: 4.792

6.  Effect of temperature on structure and function of the methanogenic archaeal community in an anoxic rice field soil.

Authors:  K J Chin; T Lukow; R Conrad
Journal:  Appl Environ Microbiol       Date:  1999-06       Impact factor: 4.792

7.  Spatial analysis of archaeal community structure in grassland soil.

Authors:  Graeme W Nicol; L Anne Glover; James I Prosser
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

8.  Archaeal nucleic acids in picoplankton from great lakes on three continents.

Authors:  B P Keough; T M Schmidt; R E Hicks
Journal:  Microb Ecol       Date:  2003-08       Impact factor: 4.552

9.  Thaumarchaeal ammonia oxidation in an acidic forest peat soil is not influenced by ammonium amendment.

Authors:  Nejc Stopnisek; Cécile Gubry-Rangin; Spela Höfferle; Graeme W Nicol; Ines Mandic-Mulec; James I Prosser
Journal:  Appl Environ Microbiol       Date:  2010-10-01       Impact factor: 4.792

10.  Biogeography and landscape-scale diversity of the dominant Crenarchaeota of soil.

Authors:  David K Oline; Steven K Schmidt; Michael C Grant
Journal:  Microb Ecol       Date:  2006-08-15       Impact factor: 4.552
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.