Literature DB >> 7538283

Recovery and phylogenetic analysis of novel archaeal rRNA sequences from a deep-sea deposit feeder.

J O McInerney1, M Wilkinson, J W Patching, T M Embley, R Powell.   

Abstract

In 1992, two independent reports based on small-subunit rRNA gene (SSU rDNA) cloning revealed the presence of novel Archaea among marine bacterioplankton. Here, we report the presence of further novel Archaea SSU rDNA sequences recovered from the midgut contents of a deep-sea marine holothurian. Phylogenetic analyses show that these abyssal Archaea are a paraphyletic component of a highly divergent clade that also includes some planktonic sequences. Our data confirm that this clade is a deep-branching lineage in the tree of life.

Entities:  

Mesh：

Substances：

Year:  1995        PMID： 7538283      PMCID： PMC167425          DOI： 10.1128/aem.61.4.1646-1648.1995

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  9 in total

1.  Novel major archaebacterial group from marine plankton.

Authors:  J A Fuhrman; K McCallum; A A Davis
Journal:  Nature       Date:  1992-03-12       Impact factor: 49.962

2.  The ribosomal RNA database project.

Authors:  G J Olsen; N Larsen; C R Woese
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

3.  Evidence that eukaryotes and eocyte prokaryotes are immediate relatives.

Authors:  M C Rivera; J A Lake
Journal:  Science       Date:  1992-07-03       Impact factor: 47.728

4.  Barophilic bacteria associated with digestive tracts of abyssal holothurians.

Authors:  J W Deming; R R Colwell
Journal:  Appl Environ Microbiol       Date:  1982-11       Impact factor: 4.792

5.  Archaea in coastal marine environments.

Authors:  E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

Review 7.  Ribosomal RNA: a key to phylogeny.

Authors:  G J Olsen; C R Woese
Journal:  FASEB J       Date:  1993-01       Impact factor: 5.191

8.  High abundance of Archaea in Antarctic marine picoplankton.

Authors:  E F DeLong; K Y Wu; B B Prézelin; R V Jovine
Journal:  Nature       Date:  1994-10-20       Impact factor: 49.962

9.  Genetic diversity in Sargasso Sea bacterioplankton.

Authors:  S J Giovannoni; T B Britschgi; C L Moyer; K G Field
Journal:  Nature       Date:  1990-05-03       Impact factor: 49.962
  9 in total
  31 in total

1.  Population structure and phylogenetic characterization of marine benthic Archaea in deep-sea sediments.

Authors:  C Vetriani; H W Jannasch; B J MacGregor; D A Stahl; A L Reysenbach
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

2.  A few cosmopolitan phylotypes dominate planktonic archaeal assemblages in widely different oceanic provinces.

Authors:  R Massana; E F DeLong; C Pedrós-Alió
Journal:  Appl Environ Microbiol       Date:  2000-05       Impact factor: 4.792

3.  Axial differences in community structure of Crenarchaeota and Euryarchaeota in the highly compartmentalized gut of the soil-feeding termite Cubitermes orthognathus.

Authors:  M W Friedrich; D Schmitt-Wagner; T Lueders; A Brune
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

4.  Natural communities of novel archaea and bacteria growing in cold sulfurous springs with a string-of-pearls-like morphology.

Authors:  C Rudolph; G Wanner; R Huber
Journal:  Appl Environ Microbiol       Date:  2001-05       Impact factor: 4.792

Review 5.  Search and discovery strategies for biotechnology: the paradigm shift.

Authors:  A T Bull; A C Ward; M Goodfellow
Journal:  Microbiol Mol Biol Rev       Date:  2000-09       Impact factor: 11.056

6.  Biogeography and landscape-scale diversity of the dominant Crenarchaeota of soil.

Authors:  David K Oline; Steven K Schmidt; Michael C Grant
Journal:  Microb Ecol       Date:  2006-08-15       Impact factor: 4.552

7.  Microbial Infections Are Associated with Embryo Mortality in Arctic-Nesting Geese.

Authors:  Cristina M Hansen; Brandt W Meixell; Caroline Van Hemert; Rebekah F Hare; Karsten Hueffer
Journal:  Appl Environ Microbiol       Date:  2015-06-05       Impact factor: 4.792

8.  Phylogenetic analysis of nonthermophilic members of the kingdom crenarchaeota and their diversity and abundance in soils

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-11       Impact factor: 4.792

9.  Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences.

Authors:  S M Barns; C F Delwiche; J D Palmer; N R Pace
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-20       Impact factor: 11.205

10.  Bacterial diversity in a deep-subsurface clay environment.

Authors:  V Boivin-Jahns; R Ruimy; A Bianchi; S Daumas; R Christen
Journal:  Appl Environ Microbiol       Date:  1996-09       Impact factor: 4.792
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.