Literature DB >> 9019401

Arrangement of tRNAs in pre- and posttranslocational ribosomes revealed by electron cryomicroscopy.

H Stark1, E V Orlova, J Rinke-Appel, N Jünke, F Mueller, M Rodnina, W Wintermeyer, R Brimacombe, M van Heel.   

Abstract

The three-dimensional structure of the translating 70S E. coli ribosome is presented in its two main conformations: the pretranslocational and the posttranslocational states. Using electron cryomicroscopy and angular reconstitution, structures at 20 A resolution were obtained, which, when compared with our earlier reconstruction of "empty" ribosomes, showed densities corresponding to tRNA molecules--at the P and E sites for posttranslocational ribosomes and at the A and P sites for pretranslocational ribosomes. The P-site tRNA lies directly above the bridge connecting the two ribosomal subunits, with the A-site tRNA fitted snugly against it at an angle of approximately 50 degrees, toward the L7/L12 side of the ribosome. The E-site tRNA appears to lie between the side lobe of the 30S subunit and the L1 protuberance.

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Year:  1997        PMID: 9019401     DOI: 10.1016/s0092-8674(00)81854-1

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  44 in total

1.  RNA location and modeling of a WD40 repeat domain within the vault.

Authors:  L B Kong; A C Siva; V A Kickhoefer; L H Rome; P L Stewart
Journal:  RNA       Date:  2000-06       Impact factor: 4.942

2.  Crystal structure of the ribosome recycling factor from Escherichia coli.

Authors:  K K Kim; K Min; S W Suh
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

Review 3.  Macromolecular mimicry.

Authors:  P Nissen; M Kjeldgaard; J Nyborg
Journal:  EMBO J       Date:  2000-02-15       Impact factor: 11.598

4.  Location of translational initiation factor IF3 on the small ribosomal subunit.

Authors:  J P McCutcheon; R K Agrawal; S M Philips; R A Grassucci; S E Gerchman; W M Clemons; V Ramakrishnan; J Frank
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

5.  Covariance of complementary rRNA loop nucleotides does not necessarily represent functional pseudoknot formation in vivo.

Authors:  N S Chernyaeva; E J Murgola
Journal:  J Bacteriol       Date:  2000-10       Impact factor: 3.490

Review 6.  P-site tRNA is a crucial initiator of ribosomal frameshifting.

Authors:  Pavel V Baranov; Raymond F Gesteland; John F Atkins
Journal:  RNA       Date:  2004-02       Impact factor: 4.942

7.  Contacts of elongation factor G with the small ribosomal subunit: cross-linking approach.

Authors:  A V Kubarenko; I N Lavrik; P V Sergiev; M Heupl; M Rodnina; W Wintermeyer; A A Bogdanov; O A Dontsova
Journal:  Dokl Biochem Biophys       Date:  2003 Nov-Dec       Impact factor: 0.788

8.  Using cryo-EM to measure the dipole potential of a lipid membrane.

Authors:  Liguo Wang; Pulkit S Bose; Fred J Sigworth
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-20       Impact factor: 11.205

Review 9.  3D electron microscopy of biological nanomachines: principles and applications.

Authors:  C O S Sorzano; S Jonic; M Cottevieille; E Larquet; N Boisset; S Marco
Journal:  Eur Biophys J       Date:  2007-07-05       Impact factor: 1.733

10.  EF-G-catalyzed translocation of anticodon stem-loop analogs of transfer RNA in the ribosome.

Authors:  S Joseph; H F Noller
Journal:  EMBO J       Date:  1998-06-15       Impact factor: 11.598

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