Literature DB >> 9017395

Interactions of Drosophila Ultrabithorax regulatory regions with native and foreign promoters.

F Casares1, W Bender, J Merriam, E Sánchez-Herrero.   

Abstract

The Ultrabithorax (Ubx) gene of the Drosophila bithorax complex is required to specify parasegments 5 and 6. Two P-element "enhancer traps" have been recovered within the locus that contain the bacterial lacZ gene under the control of the P-element promoter. The P insertion that is closer to the Ubx promoter expresses lacZ in a pattern similar to that of the normal Ubx gene, but also in parasegment 4 during embryonic development. Two deletions have been recovered that remove the normal Ubx promoter plus several kilobases on either side, but retain the lacZ reporter gene. The lacZ patterns from the deletion derivatives closely match the normal pattern of Ubx expression in late embryos and imaginal discs. The lacZ genes in the deletion derivatives are also negatively regulated by Ubx and activated in trans by Contrabithorax mutations, again like the normal Ubx gene. Thus, the deleted regions, including several kilobases around the Ubx promoter, are not required for long range interactions with Ubx regulatory regions. The deletion derivatives also stimulate transvection, a pairing-dependent interaction with the Ubx promoter on the homologous chromosome.

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Year:  1997        PMID: 9017395      PMCID: PMC1207771     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  55 in total

1.  Individual stage selector element mutations lead to reciprocal changes in beta- vs. epsilon-globin gene transcription: genetic confirmation of promoter competition during globin gene switching.

Authors:  K P Foley; J D Engel
Journal:  Genes Dev       Date:  1992-05       Impact factor: 11.361

2.  Developmental regulation of beta-globin gene switching.

Authors:  O R Choi; J D Engel
Journal:  Cell       Date:  1988-10-07       Impact factor: 41.582

3.  Distinct parasegmental and imaginal enhancers and the establishment of the expression pattern of the Ubx gene.

Authors:  V Pirrotta; C S Chan; D McCabe; S Qian
Journal:  Genetics       Date:  1995-12       Impact factor: 4.562

4.  Genetic organization of Drosophila bithorax complex.

Authors:  E Sánchez-Herrero; I Vernós; R Marco; G Morata
Journal:  Nature       Date:  1985 Jan 10-18       Impact factor: 49.962

5.  Analysis of gene expression during development in the homeotic mutant Contrabithorax of Drosophila melanogaster.

Authors:  G Morata
Journal:  J Embryol Exp Morphol       Date:  1975-08

6.  Positive and negative cis-regulatory elements in the bithoraxoid region of the Drosophila Ultrabithorax gene.

Authors:  J E Castelli-Gair; M P Capdevila; J L Micol; A García-Bellido
Journal:  Mol Gen Genet       Date:  1992-08

Review 7.  Imprinting a determined state into the chromatin of Drosophila.

Authors:  R Paro
Journal:  Trends Genet       Date:  1990-12       Impact factor: 11.639

8.  Mapping Polycomb-repressed domains in the bithorax complex using in vivo formaldehyde cross-linked chromatin.

Authors:  V Orlando; R Paro
Journal:  Cell       Date:  1993-12-17       Impact factor: 41.582

9.  Molecular mechanisms of pattern formation by the BRE enhancer of the Ubx gene.

Authors:  S Qian; M Capovilla; V Pirrotta
Journal:  EMBO J       Date:  1993-10       Impact factor: 11.598

10.  Sharp anterior boundary of homeotic gene expression conferred by the fushi tarazu protein.

Authors:  J Müller; M Bienz
Journal:  EMBO J       Date:  1992-10       Impact factor: 11.598

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  25 in total

Review 1.  Ten years of enhancer detection: lessons from the fly.

Authors:  H J Bellen
Journal:  Plant Cell       Date:  1999-12       Impact factor: 11.277

2.  Enhancer action in trans is permitted throughout the Drosophila genome.

Authors:  Ji-Long Chen; Kathryn L Huisinga; Michaela M Viering; Sharon A Ou; C-ting Wu; Pamela K Geyer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

3.  Enhancer choice in cis and in trans in Drosophila melanogaster: role of the promoter.

Authors:  James R Morris; Dmitri A Petrov; Anne M Lee; Chao-Ting Wu
Journal:  Genetics       Date:  2004-08       Impact factor: 4.562

4.  Comparing enhancer action in cis and in trans.

Authors:  Jack R Bateman; Justine E Johnson; Melissa N Locke
Journal:  Genetics       Date:  2012-05-29       Impact factor: 4.562

5.  Core promoter elements can regulate transcription on a separate chromosome in trans.

Authors:  J R Morris; P K Geyer; C T Wu
Journal:  Genes Dev       Date:  1999-02-01       Impact factor: 11.361

6.  Two modes of transvection: enhancer action in trans and bypass of a chromatin insulator in cis.

Authors:  J R Morris; J L Chen; P K Geyer; C T Wu
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-01       Impact factor: 11.205

7.  The Role of Insulators in Transgene Transvection in Drosophila.

Authors:  Pawel Piwko; Ilektra Vitsaki; Ioannis Livadaras; Christos Delidakis
Journal:  Genetics       Date:  2019-04-04       Impact factor: 4.562

8.  The Capacity to Act in Trans Varies Among Drosophila Enhancers.

Authors:  Amanda J Blick; Ilana Mayer-Hirshfeld; Beatriz R Malibiran; Matthew A Cooper; Pieter A Martino; Justine E Johnson; Jack R Bateman
Journal:  Genetics       Date:  2016-03-16       Impact factor: 4.562

9.  Transvection in Drosophila: trans-interaction between yellow enhancers and promoter is strongly suppressed by a cis-promoter only in certain genomic regions.

Authors:  Oksana Kravchuk; Maria Kim; Pavel Klepikov; Alexander Parshikov; Pavel Georgiev; Mikhail Savitsky
Journal:  Chromosoma       Date:  2016-06-14       Impact factor: 4.316

10.  Regulation of Ubx expression by epigenetic enhancer silencing in response to Ubx levels and genetic variation.

Authors:  Michael A Crickmore; Vikram Ranade; Richard S Mann
Journal:  PLoS Genet       Date:  2009-09-04       Impact factor: 5.917

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