Literature DB >> 27300555

Transvection in Drosophila: trans-interaction between yellow enhancers and promoter is strongly suppressed by a cis-promoter only in certain genomic regions.

Oksana Kravchuk1, Maria Kim2, Pavel Klepikov3, Alexander Parshikov4, Pavel Georgiev5, Mikhail Savitsky6,7.   

Abstract

Transvection is a phenomenon of interallelic communication whereby enhancers of one allele can activate a promoter located on the homologous chromosome. It has been shown for many independent genes that enhancers preferentially act on the cis-linked promoter, but deletion of this promoter allows the enhancers to act in trans. Here, we tested whether this cis-preference in the enhancer-promoter interaction could be reconstituted outside of the natural position of a gene. The yellow gene was chosen as a model system. Transgenic flies were generated that carried the yellow gene modified by the inclusion of the strategically placed recognition sites for the Cre and Flp recombinases. To facilitate transvection, an endogenous Su(Hw) insulator (1A2) or gypsy insulator was placed behind the yellow gene. Independent action of the recombinases produced a pair of derivative alleles, one containing the promoter-driven yellow gene, and the other, the enhancers and promoter that failed to produce a functional yellow protein. As a result, we observed strong transvection in many genomic regions, suggesting that a complete cis-preference of the enhancer-promoter interactions is mainly restricted to genes in their natural loci.

Entities:  

Keywords:  Chromatin insulators; Chromosome pairing; Enhancer–promoter communication; Su(Hw); Transcriptional regulation

Mesh:

Substances:

Year:  2016        PMID: 27300555     DOI: 10.1007/s00412-016-0605-6

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  55 in total

Review 1.  Transvection in Drosophila.

Authors:  James A Kennison; Jeffrey W Southworth
Journal:  Adv Genet       Date:  2002       Impact factor: 1.944

2.  Enhancer action in trans is permitted throughout the Drosophila genome.

Authors:  Ji-Long Chen; Kathryn L Huisinga; Michaela M Viering; Sharon A Ou; C-ting Wu; Pamela K Geyer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

Review 3.  Transvection effects in Drosophila.

Authors:  Ian W Duncan
Journal:  Annu Rev Genet       Date:  2002-06-11       Impact factor: 16.830

4.  An endogenous Su(Hw) insulator separates the yellow gene from the Achaete-scute gene complex in Drosophila.

Authors:  Anton Golovnin; Inna Biryukova; Inna Birukova; Olga Romanova; Margarita Silicheva; Akeksander Parshikov; Ekaterina Savitskaya; Vincenzo Pirrotta; Pavel Georgiev
Journal:  Development       Date:  2003-07       Impact factor: 6.868

Review 5.  Drosophila under the lens: imaging from chromosomes to whole embryos.

Authors:  Cornelia Fritsch; Ginette Ploeger; Donna J Arndt-Jovin
Journal:  Chromosome Res       Date:  2006       Impact factor: 5.239

6.  Developmental regulation of beta-globin gene switching.

Authors:  O R Choi; J D Engel
Journal:  Cell       Date:  1988-10-07       Impact factor: 41.582

Review 7.  The 3D Genome as Moderator of Chromosomal Communication.

Authors:  Job Dekker; Leonid Mirny
Journal:  Cell       Date:  2016-03-10       Impact factor: 41.582

8.  Genomic context modulates insulator activity through promoter competition.

Authors:  H N Cai; Z Zhang; J R Adams; P Shen
Journal:  Development       Date:  2001-11       Impact factor: 6.868

Review 9.  Looping back to leap forward: transcription enters a new era.

Authors:  Michael Levine; Claudia Cattoglio; Robert Tjian
Journal:  Cell       Date:  2014-03-27       Impact factor: 41.582

10.  Exploiting position effects and the gypsy retrovirus insulator to engineer precisely expressed transgenes.

Authors:  Michele Markstein; Chrysoula Pitsouli; Christians Villalta; Susan E Celniker; Norbert Perrimon
Journal:  Nat Genet       Date:  2008-03-02       Impact factor: 38.330

View more
  1 in total

1.  The Role of Insulators in Transgene Transvection in Drosophila.

Authors:  Pawel Piwko; Ilektra Vitsaki; Ioannis Livadaras; Christos Delidakis
Journal:  Genetics       Date:  2019-04-04       Impact factor: 4.562

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.