Literature DB >> 9016678

High-throughput plasmid mini preparations facilitated by micro-mixing.

W L Ng1, M Schummer, F D Cirisano, R L Baldwin, B Y Karlan, L Hood.   

Abstract

We have developed a reliable high-throughput plasmid isolation system using a 96-well plate format. This system combines a novel glass bead micro-mixing method with modified alkaline lysis and Sephacryl S-500 DNA purification procedures. Mechanical forces generated by vortexing glass beads inside each well of the 96-well plates ensure that the bacterial pellets are homogeneously resuspended, the cells are completely lyzed, and the resulting bacterial lysates are thoroughly mixed with the potassium acetate solution. The vortexing speed and duration for glass bead mixing have been standardized to facilitate plasmid DNA yields without significant adjustments.

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Year:  1996        PMID: 9016678      PMCID: PMC146330          DOI: 10.1093/nar/24.24.5045

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  12 in total

1.  Magnetic bead purification of M13 DNA sequencing templates.

Authors:  R P Alderton; L M Eccleston; R P Howe; C A Read; M A Reeve; S Beck
Journal:  Anal Biochem       Date:  1992-02-14       Impact factor: 3.365

Review 2.  Hybridization analyses of arrayed cDNA libraries.

Authors:  G G Lennon; H Lehrach
Journal:  Trends Genet       Date:  1991-10       Impact factor: 11.639

3.  High-throughput DNA preparation system.

Authors:  H R Garner; B Armstrong; D A Kramarsky
Journal:  Genet Anal Tech Appl       Date:  1992 Oct-Dec

4.  A high-throughput plasmid DNA preparation method.

Authors:  G M Huang; K Wang; C Kuo; B Paeper; L Hood
Journal:  Anal Biochem       Date:  1994-11-15       Impact factor: 3.365

5.  Preparation of large numbers of plasmid DNA samples in microtiter plates by the alkaline lysis method.

Authors:  T J Gibson; J E Sulston
Journal:  Gene Anal Tech       Date:  1987 May-Jun

6.  Rapid preparation of bacteriophage DNA for sequence analysis in sets of 96 clones, using filtration.

Authors:  I C Eperon
Journal:  Anal Biochem       Date:  1986-08-01       Impact factor: 3.365

7.  A microtiter plate-based high-throughput DNA purification method.

Authors:  K Wang; L Gan; C Boysen; L Hood
Journal:  Anal Biochem       Date:  1995-03-20       Impact factor: 3.365

8.  DNA purification and isolation using a solid-phase.

Authors:  T L Hawkins; T O'Connor-Morin; A Roy; C Santillan
Journal:  Nucleic Acids Res       Date:  1994-10-25       Impact factor: 16.971

9.  Secreted ovarian stromal substance inhibits ovarian epithelial cell proliferation.

Authors:  B Y Karlan; R L Baldwin; F D Cirisano; P W Mamula; J Jones; L D Lagasse
Journal:  Gynecol Oncol       Date:  1995-10       Impact factor: 5.482

10.  Steroid hormonal independence of HER-2/neu mRNA expression in four human ovarian carcinoma cell lines.

Authors:  J Jones; L D Lagasse; B Y Karlan
Journal:  Gynecol Oncol       Date:  1994-12       Impact factor: 5.482

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  6 in total

1.  Novel division level bacterial diversity in a Yellowstone hot spring.

Authors:  P Hugenholtz; C Pitulle; K L Hershberger; N R Pace
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

2.  Glass bead purification of plasmid template DNA for high throughput sequencing of mammalian genomes.

Authors:  Debra A Dederich; Geoffrey Okwuonu; Toni Garner; Amanda Denn; Angelica Sutton; Michael Escotto; Ashley Martindale; Oliver Delgado; Donna M Muzny; Richard A Gibbs; Michael L Metzker
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

3.  Prevalence of corynebacterial 16S rRNA sequences in patients with bacterial and "nonbacterial" prostatitis.

Authors:  M A Tanner; D Shoskes; A Shahed; N R Pace
Journal:  J Clin Microbiol       Date:  1999-06       Impact factor: 5.948

4.  Comparative genome organization of human, murine, and feline MHC class II region.

Authors:  Naoya Yuhki; Thomas Beck; Robert M Stephens; Yoko Nishigaki; Kymberly Newmann; Stephen J O'Brien
Journal:  Genome Res       Date:  2003-05-12       Impact factor: 9.043

5.  Extracellular quinones affecting methane production and methanogenic community in paddy soil.

Authors:  Jielong Xu; Li Zhuang; Guiqin Yang; Yong Yuan; Shungui Zhou
Journal:  Microb Ecol       Date:  2013-08-04       Impact factor: 4.552

6.  Microbial diversity in a hydrocarbon- and chlorinated-solvent-contaminated aquifer undergoing intrinsic bioremediation.

Authors:  M A Dojka; P Hugenholtz; S K Haack; N R Pace
Journal:  Appl Environ Microbiol       Date:  1998-10       Impact factor: 4.792

  6 in total

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