Literature DB >> 9016590

Polynucleotide:adenosine glycosidase activity of ribosome-inactivating proteins: effect on DNA, RNA and poly(A).

L Barbieri1, P Valbonesi, E Bonora, P Gorini, A Bolognesi, F Stirpe.   

Abstract

Ribosome-inactivating proteins (RIP) are a family of plant enzymes for which a unique activity was determined: rRNAN-glycosidase at a specific universally conserved position, A4324in the case of rat ribosomes. Recently we have shown that the RIP from Saponaria officinalis have a much wider substrate specificity: they are actually polynucleotide:adenosine glycosidases. Here we extend studies on substrate specificity to most known RIP: 52 purified proteins, both type 1 (single-chain) and type 2 (two chain, an enzymatic chain and a lectin chain) were examined for adenine release on various substrates including RNAs from different sources, DNA, and poly(A). All RIP depurinated extensively DNA and some released adenine from all adenine-containing polynucleotides tested. From experimental evidence the entire class of plant proteins, up to now called ribosome-inactivating proteins, may be classified as polynucleotide:adenosine glycosidases. The newly identified substrates may be implicated in the biological role(s) of RIP.

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Year:  1997        PMID: 9016590      PMCID: PMC146458          DOI: 10.1093/nar/25.3.518

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  38 in total

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Authors:  M X Li; H W Yeung; L P Pan; S I Chan
Journal:  Nucleic Acids Res       Date:  1991-11-25       Impact factor: 16.971

3.  Properties of volkensin, a toxic lectin from Adenia volkensii.

Authors:  F Stirpe; L Barbieri; A Abbondanza; A I Falasca; A N Brown; K Sandvig; S Olsnes; A Pihl
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4.  DNA fragmentation induced in macrophages by gliotoxin does not require protein synthesis and is preceded by raised inositol triphosphate levels.

Authors:  P Waring
Journal:  J Biol Chem       Date:  1990-08-25       Impact factor: 5.157

5.  Induction of apoptosis (programmed cell death) in human leukemic HL-60 cells by inhibition of RNA or protein synthesis.

Authors:  S J Martin; S V Lennon; A M Bonham; T G Cotter
Journal:  J Immunol       Date:  1990-09-15       Impact factor: 5.422

6.  Extracellular localization of pokeweed antiviral protein.

Authors:  M P Ready; D T Brown; J D Robertus
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

7.  Some ribosome-inactivating proteins depurinate ribosomal RNA at multiple sites.

Authors:  L Barbieri; J M Ferreras; A Barraco; P Ricci; F Stirpe
Journal:  Biochem J       Date:  1992-08-15       Impact factor: 3.857

8.  A Saporin-6 cDNA containing a precursor sequence coding for a carboxyl-terminal extension.

Authors:  L Benatti; G Nitti; M Solinas; B Valsasina; A Vitale; A Ceriotti; M R Soria
Journal:  FEBS Lett       Date:  1991-10-21       Impact factor: 4.124

9.  Ribosome-inactivating proteins from plant cells in culture.

Authors:  L Barbieri; A Bolognesi; P Cenini; A I Falasca; A Minghetti; L Garofano; A Guicciardi; D Lappi; S P Miller; F Stirpe
Journal:  Biochem J       Date:  1989-02-01       Impact factor: 3.857

10.  Differential requirement of ATP and extra-ribosomal proteins for ribosome inactivation by eight RNA N-glycosidases.

Authors:  D Carnicelli; M Brigotti; L Montanaro; S Sperti
Journal:  Biochem Biophys Res Commun       Date:  1992-01-31       Impact factor: 3.575

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  71 in total

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Authors:  M Brigotti; D Carnicelli; A Pallanca; S Rizzi; P Accorsi; L Montanaro; S Sperti
Journal:  RNA       Date:  1999-10       Impact factor: 4.942

2.  Down-regulation of some miRNAs by degrading their precursors contributes to anti-cancer effect of mistletoe lectin-I.

Authors:  Lin-Na Li; Hua-Dong Zhang; Run Zhi; Shou-Jun Yuan
Journal:  Br J Pharmacol       Date:  2011-01       Impact factor: 8.739

3.  Structural studies on a non-toxic homologue of type II RIPs from bitter gourd: Molecular basis of non-toxicity, conformational selection and glycan structure.

Authors:  Thyageshwar Chandran; Alok Sharma; M Vijayan
Journal:  J Biosci       Date:  2015-12       Impact factor: 1.826

4.  X-ray crystallographic analysis of the structural basis for the interaction of pokeweed antiviral protein with guanine residues of ribosomal RNA.

Authors:  I V Kurinov; F Rajamohan; T K Venkatachalam; F M Uckun
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

Review 5.  Ribosome-inactivating proteins in plant biology.

Authors:  Sang-Wook Park; Ramarao Vepachedu; Neelam Sharma; Jorge M Vivanco
Journal:  Planta       Date:  2004-09-03       Impact factor: 4.116

6.  Development of a quantitative RT-PCR assay to examine the kinetics of ribosome depurination by ribosome inactivating proteins using Saccharomyces cerevisiae as a model.

Authors:  Michael Pierce; Jennifer Nielsen Kahn; Jiachi Chiou; Nilgun E Tumer
Journal:  RNA       Date:  2010-11-23       Impact factor: 4.942

7.  Ricin inhibits activation of the unfolded protein response by preventing splicing of the HAC1 mRNA.

Authors:  Bijal A Parikh; Andrew Tortora; Xiao-Ping Li; Nilgun E Tumer
Journal:  J Biol Chem       Date:  2008-01-07       Impact factor: 5.157

8.  Ribosome-inactivating protein and apoptosis: abrin causes cell death via mitochondrial pathway in Jurkat cells.

Authors:  Sriram Narayanan; Avadhesha Surolia; Anjali A Karande
Journal:  Biochem J       Date:  2004-01-01       Impact factor: 3.857

9.  Transition state analogues in structures of ricin and saporin ribosome-inactivating proteins.

Authors:  Meng-Chiao Ho; Matthew B Sturm; Steven C Almo; Vern L Schramm
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-17       Impact factor: 11.205

10.  Crystallization and preliminary X-ray diffraction data analysis of stenodactylin, a highly toxic type 2 ribosome-inactivating protein from Adenia stenodactyla.

Authors:  Giovanna Tosi; Simona Fermani; Giuseppe Falini; Letizia Polito; Massimo Bortolotti; Andrea Bolognesi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-12-25
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