Literature DB >> 9016493

The EMBL Nucleotide Sequence Database.

G Stoesser1, P Sterk, M A Tuli, P J Stoehr, G N Cameron.   

Abstract

The EMBL Nucleotide Sequence Database is a comprehensive database of DNA and RNA sequences directly submitted from researchers and genome sequencing groups and collected from the scientific literature and patent applications. In collaboration with DDBJ and GenBank the database is produced, maintained and distributed at the European Bioinformatics Institute (EBI) and constitutes Europe's primary nucleotide sequence resource. Database releases are produced quarterly and are distributed on CD-ROM. EBI's network services allow access to the most up-to-date data collection via Internet and World Wide Web interface, providing database searching and sequence similarity facilities plus access to a large number of additional databases.

Mesh:

Year:  1997        PMID: 9016493      PMCID: PMC146376          DOI: 10.1093/nar/25.1.7

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  53 in total

1.  NRL-3D: a sequence-structure database derived from the protein data bank (PDB) and searchable within the PIR environment.

Authors:  N Pattabiraman; K Namboodiri; A Lowrey; B P Gaber
Journal:  Protein Seq Data Anal       Date:  1990-10

2.  Compilation of small RNA sequences.

Authors:  J Gu; R Reddy
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

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Journal:  Comput Chem       Date:  1996-03

4.  A common language for physical mapping of the human genome.

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Journal:  Science       Date:  1989-09-29       Impact factor: 47.728

5.  A fundamental division in the Alu family of repeated sequences.

Authors:  J Jurka; T Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1988-07       Impact factor: 11.205

Review 6.  Compilation of transcription regulating proteins.

Authors:  E Wingender
Journal:  Nucleic Acids Res       Date:  1988-03-25       Impact factor: 16.971

7.  The European Bioinformatics Institute (EBI) databases.

Authors:  D B Emmert; P J Stoehr; G Stoesser; G N Cameron
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

8.  GenBank.

Authors:  D A Benson; M Boguski; D J Lipman; J Ostell
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

9.  Modular arrangement of proteins as inferred from analysis of homology.

Authors:  E L Sonnhammer; D Kahn
Journal:  Protein Sci       Date:  1994-03       Impact factor: 6.725

10.  ECD--a totally integrated database of Escherichia coli K12.

Authors:  R Wahl; P Rice; C M Rice; M Kröger
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

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  10 in total

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Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  The Ensembl automatic gene annotation system.

Authors:  Val Curwen; Eduardo Eyras; T Daniel Andrews; Laura Clarke; Emmanuel Mongin; Steven M J Searle; Michele Clamp
Journal:  Genome Res       Date:  2004-05       Impact factor: 9.043

3.  Development of conventional and real-time PCR assays for detection of Legionella DNA in respiratory specimens.

Authors:  K Rantakokko-Jalava; J Jalava
Journal:  J Clin Microbiol       Date:  2001-08       Impact factor: 5.948

Review 4.  Nucleic Acids Analysis.

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Journal:  Sci China Chem       Date:  2020-12-02       Impact factor: 9.445

Review 5.  An integrated computational pipeline and database to support whole-genome sequence annotation.

Authors:  C J Mungall; S Misra; B P Berman; J Carlson; E Frise; N Harris; B Marshall; S Shu; J S Kaminker; S E Prochnik; C D Smith; E Smith; J L Tupy; C Wiel; G M Rubin; S E Lewis
Journal:  Genome Biol       Date:  2002-12-23       Impact factor: 13.583

6.  Degradation of 1,2,3,4-tetrachlorobenzene by pseudomonas chlororaphis RW71

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-10       Impact factor: 4.792

7.  A Bottom-up Approach to Data Annotation in Neurophysiology.

Authors:  Jan Grewe; Thomas Wachtler; Jan Benda
Journal:  Front Neuroinform       Date:  2011-08-30       Impact factor: 4.081

8.  NeXML: rich, extensible, and verifiable representation of comparative data and metadata.

Authors:  Rutger A Vos; James P Balhoff; Jason A Caravas; Mark T Holder; Hilmar Lapp; Wayne P Maddison; Peter E Midford; Anurag Priyam; Jeet Sukumaran; Xuhua Xia; Arlin Stoltzfus
Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

Review 9.  Apollo: a sequence annotation editor.

Authors:  S E Lewis; S M J Searle; N Harris; M Gibson; V Lyer; J Richter; C Wiel; L Bayraktaroglu; E Birney; M A Crosby; J S Kaminker; B B Matthews; S E Prochnik; C D Smithy; J L Tupy; G M Rubin; S Misra; C J Mungall; M E Clamp
Journal:  Genome Biol       Date:  2002-12-23       Impact factor: 13.583

10.  The Taxus genome provides insights into paclitaxel biosynthesis.

Authors:  Xingyao Xiong; Junbo Gou; Qinggang Liao; Yanlin Li; Qian Zhou; Guiqi Bi; Chong Li; Ran Du; Xiaotong Wang; Tianshu Sun; Lvjun Guo; Haifei Liang; Pengjun Lu; Yaoyao Wu; Zhonghua Zhang; Dae-Kyun Ro; Yi Shang; Sanwen Huang; Jianbin Yan
Journal:  Nat Plants       Date:  2021-07-15       Impact factor: 15.793

  10 in total

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