Literature DB >> 9012809

The thioredoxin binding domain of bacteriophage T7 DNA polymerase confers processivity on Escherichia coli DNA polymerase I.

E Bedford1, S Tabor, C C Richardson.   

Abstract

Bacteriophage T7 DNA polymerase shares extensive sequence homology with Escherichia coli DNA polymerase I. However, in vivo, E. coli DNA polymerase I is involved primarily in the repair of DNA whereas T7 DNA polymerase is responsible for the replication of the viral genome. In accord with these roles, T7 DNA polymerase is highly processive while E. coli DNA polymerase I has low processivity. The high processivity of T7 DNA polymerase is achieved through tight binding to its processivity factor, E. coli thioredoxin. We have identified a unique 76-residue domain in T7 DNA polymerase responsible for this interaction. Insertion of this domain into the homologous site in E. coli DNA polymerase I results in a dramatic increase in the processivity of the chimeric DNA polymerase, a phenomenon that is dependent upon its binding to thioredoxin.

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Year:  1997        PMID: 9012809      PMCID: PMC19538          DOI: 10.1073/pnas.94.2.479

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  Processiveness of DNA polymerases. A comparative study using a simple procedure.

Authors:  S K Das; R K Fujimura
Journal:  J Biol Chem       Date:  1979-02-25       Impact factor: 5.157

2.  On the processive mechanism of Escherichia coli DNA polymerase I. Quantitative assessment of processivity.

Authors:  R A Bambara; D Uyemura; T Choi
Journal:  J Biol Chem       Date:  1978-01-25       Impact factor: 5.157

3.  Bacteriophage T7 deoxyribonucleic acid replication invitro. Bacteriophage T7 DNA polymerase: an an emzyme composed of phage- and host-specific subunits.

Authors:  P Modrich; C C Richardson
Journal:  J Biol Chem       Date:  1975-07-25       Impact factor: 5.157

4.  Subunit structure of mitochondrial DNA polymerase from Drosophila embryos. Physical and immunological studies.

Authors:  M W Olson; Y Wang; R H Elder; L S Kaguni
Journal:  J Biol Chem       Date:  1995-12-01       Impact factor: 5.157

5.  Construction of a plasmid that overproduces the large proteolytic fragment (Klenow fragment) of DNA polymerase I of Escherichia coli.

Authors:  C M Joyce; N D Grindley
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

6.  Deoxyribonucleic acid synthesis in bacteriophage SP01-infected Bacillus subtilis. II. Purification and catalytic properties of a deoxyribonucleic acid polymerase induced after infection.

Authors:  C O Yehle; A T Ganesan
Journal:  J Biol Chem       Date:  1973-11-10       Impact factor: 5.157

7.  Amino acid residues critical for the interaction between bacteriophage T7 DNA polymerase and Escherichia coli thioredoxin.

Authors:  J S Himawan; C C Richardson
Journal:  J Biol Chem       Date:  1996-08-16       Impact factor: 5.157

8.  Escherichia coli thioredoxin: a subunit of bacteriophage T7 DNA polymerase.

Authors:  D F Mark; C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1976-03       Impact factor: 11.205

9.  T7-induced DNA polymerase. Characterization of associated exonuclease activities and resolution into biologically active subunits.

Authors:  S Adler; P Modrich
Journal:  J Biol Chem       Date:  1979-11-25       Impact factor: 5.157

10.  Structural and functional organization of the DNA polymerase of bacteriophage T7.

Authors:  X Yang; C C Richardson
Journal:  J Biol Chem       Date:  1996-09-27       Impact factor: 5.157

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  31 in total

1.  Directed evolution of polymerase function by compartmentalized self-replication.

Authors:  F J Ghadessy; J L Ong; P Holliger
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-27       Impact factor: 11.205

2.  A unique loop in the DNA-binding crevice of bacteriophage T7 DNA polymerase influences primer utilization.

Authors:  K Chowdhury; S Tabor; C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

3.  Insertion of the T3 DNA polymerase thioredoxin binding domain enhances the processivity and fidelity of Taq DNA polymerase.

Authors:  John F Davidson; Richard Fox; Dawn D Harris; Sally Lyons-Abbott; Lawrence A Loeb
Journal:  Nucleic Acids Res       Date:  2003-08-15       Impact factor: 16.971

Review 4.  Accuracy, lesion bypass, strand displacement and translocation by DNA polymerases.

Authors:  Thomas A Steitz; Y Whitney Yin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-01-29       Impact factor: 6.237

5.  A novel strategy to engineer DNA polymerases for enhanced processivity and improved performance in vitro.

Authors:  Yan Wang; Dennis E Prosen; Li Mei; John C Sullivan; Michael Finney; Peter B Vander Horn
Journal:  Nucleic Acids Res       Date:  2004-02-18       Impact factor: 16.971

Review 6.  The thioredoxin superfamily: redundancy, specificity, and gray-area genomics.

Authors:  F Aslund; J Beckwith
Journal:  J Bacteriol       Date:  1999-03       Impact factor: 3.490

7.  Conformational dynamics of bacteriophage T7 DNA polymerase and its processivity factor, Escherichia coli thioredoxin.

Authors:  Barak Akabayov; Sabine R Akabayov; Seung-Joo Lee; Stanley Tabor; Arkadiusz W Kulczyk; Charles C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-09       Impact factor: 11.205

8.  Two modes of interaction of the single-stranded DNA-binding protein of bacteriophage T7 with the DNA polymerase-thioredoxin complex.

Authors:  Sharmistha Ghosh; Samir M Hamdan; Charles C Richardson
Journal:  J Biol Chem       Date:  2010-04-06       Impact factor: 5.157

9.  Bi- and Multi-directional Gene Transfer in the Natural Populations of Polyvalent Bacteriophages, and Their Host Species Spectrum Representing Foodborne Versus Other Human and/or Animal Pathogens.

Authors:  Ekaterine Gabashvili; Saba Kobakhidze; Stylianos Koulouris; Tobin Robinson; Mamuka Kotetishvili
Journal:  Food Environ Virol       Date:  2021-01-23       Impact factor: 2.778

10.  Thioredoxin suppresses microscopic hopping of T7 DNA polymerase on duplex DNA.

Authors:  Candice M Etson; Samir M Hamdan; Charles C Richardson; Antoine M van Oijen
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-11       Impact factor: 11.205

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