Literature DB >> 8702717

Amino acid residues critical for the interaction between bacteriophage T7 DNA polymerase and Escherichia coli thioredoxin.

J S Himawan1, C C Richardson.   

Abstract

Upon infection of Escherichia coli, bacteriophage T7 annexes a host protein, thioredoxin, to serve as a processivity factor for its DNA polymerase, T7 gene 5 protein. In a previous communication (Himawan, J., and Richardson, C. C. (1992) Proc. Natl. Acad. Sci. U. S. A. 89, 9774-9778), we reported that an E. coli strain encoding a Gly-74 to Asp-74 (G74D) thioredoxin mutation could not support wild-type T7 growth and that in vivo, six mutations in T7 gene 5 could individually suppress this G74D thioredoxin defect. In the present study, we report the purification and biochemical characterization of the G74D thioredoxin mutant and two suppressor gene 5 proteins, a Glu-319 to Lys-319 (E319K) mutant of gene 5 protein and an Ala-45 to Thr-45 (A45T) mutant. The suppressor E319K mutation, positioned within the DNA polymerization domain of gene 5 protein, appears to suppress the parental thioredoxin mutation by compensating for the binding defect that was caused by the G74D alteration. We suggest that the Glu-319 residue of T7 gene 5 protein and the Gly-74 residue of E. coli thioredoxin define a contact point or site of interaction between the two proteins. In contrast, the A45T mutation in gene 5 protein, located within the 3' to 5' exonuclease domain, does not suppress the G74D thioredoxin mutation by simple restoration of binding affinity. Based upon our understanding of the mechanisms of suppression, we propose a model for the T7 gene 5 protein-E. coli thioredoxin interaction.

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Year:  1996        PMID: 8702717     DOI: 10.1074/jbc.271.33.19999

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  9 in total

1.  A unique loop in the DNA-binding crevice of bacteriophage T7 DNA polymerase influences primer utilization.

Authors:  K Chowdhury; S Tabor; C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

2.  Insertion of the T3 DNA polymerase thioredoxin binding domain enhances the processivity and fidelity of Taq DNA polymerase.

Authors:  John F Davidson; Richard Fox; Dawn D Harris; Sally Lyons-Abbott; Lawrence A Loeb
Journal:  Nucleic Acids Res       Date:  2003-08-15       Impact factor: 16.971

3.  Force-clamp spectroscopy detects residue co-evolution in enzyme catalysis.

Authors:  Raul Perez-Jimenez; Arun P Wiita; David Rodriguez-Larrea; Pallav Kosuri; Jose A Gavira; Jose M Sanchez-Ruiz; Julio M Fernandez
Journal:  J Biol Chem       Date:  2008-08-07       Impact factor: 5.157

4.  Peptide ligands specific to the oxidized form of Escherichia coli thioredoxin.

Authors:  Michael D Scholle; Bridget S Banach; Samir M Hamdan; Charles C Richardson; Brian K Kay
Journal:  Biochim Biophys Acta       Date:  2008-07-11

5.  The thioredoxin binding domain of bacteriophage T7 DNA polymerase confers processivity on Escherichia coli DNA polymerase I.

Authors:  E Bedford; S Tabor; C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1997-01-21       Impact factor: 11.205

6.  Thioredoxin, the processivity factor, sequesters an exposed cysteine in the thumb domain of bacteriophage T7 DNA polymerase.

Authors:  Ngoc Q Tran; Seung-Joo Lee; Barak Akabayov; Donald E Johnson; Charles C Richardson
Journal:  J Biol Chem       Date:  2012-09-25       Impact factor: 5.157

Review 7.  Processivity factor of DNA polymerase and its expanding role in normal and translesion DNA synthesis.

Authors:  Zhihao Zhuang; Yongxing Ai
Journal:  Biochim Biophys Acta       Date:  2009-07-01

8.  Interactions of Escherichia coli thioredoxin, the processivity factor, with bacteriophage T7 DNA polymerase and helicase.

Authors:  Sharmistha Ghosh; Samir M Hamdan; Timothy E Cook; Charles C Richardson
Journal:  J Biol Chem       Date:  2008-08-30       Impact factor: 5.157

9.  Insights into the structural dynamics of the bacteriophage T7 DNA polymerase and its complexes.

Authors:  Damian J Magill; John W McGrath; Vincent O'Flaherty; John P Quinn; Leonid A Kulakov
Journal:  J Mol Model       Date:  2018-06-01       Impact factor: 1.810

  9 in total

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