Literature DB >> 8980682

Crystallographic evidence for C alpha-H...O=C hydrogen bonds in a collagen triple helix.

J Bella1, H M Berman.   

Abstract

The crystal structure of the collagen triple-helical peptide (Pro-Hyp-Gly)4-Pro-Hyp-Ala-(Pro-Hyp-Gly)5 shows evidence for the existence of interchain contacts between alpha-carbon hydrogens from Gly and Hyp residues, and carbonyl groups from Gly and Pro residues on neighboring chains. The geometrical disposition of these contacts makes it reasonable to describe them as C alpha-H...O=C hydrogen bonds. Two repetitive patterns can be identified, and one of them is identical to a similar type of interaction reported recently for beta-sheets in globular proteins, which suggests a more universal character for C-H...O hydrogen bonds in building protein secondary structure elements. They are presumably much weaker in energy than the interchain N-H...O=C hydrogen bonds responsible for the alignment of the three chains in the collagen triple helix, and therefore their contribution will be a small but cooperative decrease on the total interchain hydrogen bonding energy.

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Year:  1996        PMID: 8980682     DOI: 10.1006/jmbi.1996.0673

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  22 in total

1.  The Calpha ---H...O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions.

Authors:  A Senes; I Ubarretxena-Belandia; D M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

2.  NCI: A server to identify non-canonical interactions in protein structures.

Authors:  M Madan Babu
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

3.  Designed to fail: a novel mode of collagen fibril disruption and its relevance to tissue toughness.

Authors:  Samuel P Veres; J Michael Lee
Journal:  Biophys J       Date:  2012-06-19       Impact factor: 4.033

4.  Influence of C-H...O interactions on the structural stability of β-lactamases.

Authors:  P Lavanya; Sudha Ramaiah; Anand Anbarasu
Journal:  J Biol Phys       Date:  2013-06-25       Impact factor: 1.365

5.  Perplexing cooperative folding and stability of a low-sequence complexity, polyproline 2 protein lacking a hydrophobic core.

Authors:  Zachary P Gates; Michael C Baxa; Wookyung Yu; Joshua A Riback; Hui Li; Benoît Roux; Stephen B H Kent; Tobin R Sosnick
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-13       Impact factor: 11.205

Review 6.  Dentin on the nanoscale: Hierarchical organization, mechanical behavior and bioinspired engineering.

Authors:  Luiz E Bertassoni
Journal:  Dent Mater       Date:  2017-04-14       Impact factor: 5.304

7.  Water distribution in dentin matrices: bound vs. unbound water.

Authors:  Kelli A Agee; Anuradha Prakki; Tariq Abu-Haimed; Ghada H Naguib; Manar Abu Nawareg; Arzu Tezvergil-Mutluay; Debora L S Scheffel; Chen Chen; Seung Soon Jang; Hyea Hwang; Martha Brackett; Geneviéve Grégoire; Franklin R Tay; Lorenzo Breschi; David H Pashley
Journal:  Dent Mater       Date:  2015-01-19       Impact factor: 5.304

8.  Complexation of phosphatidylcholine lipids with cholesterol.

Authors:  Sagar A Pandit; David Bostick; Max L Berkowitz
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

Review 9.  Collagen structure and stability.

Authors:  Matthew D Shoulders; Ronald T Raines
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

10.  Mechanistic Insights into the Structural Stability of Collagen-Containing Biomaterials Such as Bones and Cartilage.

Authors:  Nidhi Tiwari; Sungsool Wi; Frederic Mentink-Vigier; Neeraj Sinha
Journal:  J Phys Chem B       Date:  2021-04-30       Impact factor: 2.991

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