Literature DB >> 8977129

Core mutants of the immunoglobulin binding domain of streptococcal protein G: stability and structural integrity.

A M Gronenborn1, M K Frank, G M Clore.   

Abstract

A library of core mutants of the GB1 domain of streptococcal protein G was created, and the structure and stability of selected members was assessed by 1H-15N heteronuclear correlation NMR spectroscopy and fluorescence. All mutants comprised changes in beta-sheet residues, with sidechains at positions 5 (Leu), 7 (Leu), 52 (Phe) and 54 (Val) forming the beta-sheet side of the sheet-helix core interface. A solvent exposed position Ile-6 was chosen as a control. Randomization of bases at codon positions 1 and 3 with thymine at position 2 introduces five possible hydrophobic amino acids, namely Leu, Val, Ile, Phe, and Met. The distribution of encoded amino acids at all five positions is approximately as expected theoretically and indicates that no major bias was introduced towards particular residues. The overall structural integrity of several mutants, as assessed by NMR, ranges from very close to wild type to fully unfolded. Interestingly, the stability of the mutants is not strictly correlated with the number of changes or residue volume.

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Year:  1996        PMID: 8977129     DOI: 10.1016/s0014-5793(96)01262-8

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  11 in total

1.  Designed protein G core variants fold to native-like structures: sequence selection by ORBIT tolerates variation in backbone specification.

Authors:  S A Ross; C A Sarisky; A Su; S L Mayo
Journal:  Protein Sci       Date:  2001-02       Impact factor: 6.725

2.  A novel and simple method of production and biophysical characterization of a mini-membrane protein, Ost4p: a subunit of yeast oligosaccharyl transferase.

Authors:  Amit Kumar; Priscilla Ward; Uma V Katre; Smita Mohanty
Journal:  Biopolymers       Date:  2012-02-03       Impact factor: 2.505

3.  Synthesis, folding, and structure of the beta-turn mimic modified B1 domain of streptococcal protein G.

Authors:  B Odaert; F Jean; C Boutillon; E Buisine; O Melnyk; A Tartar; G Lippens
Journal:  Protein Sci       Date:  1999-12       Impact factor: 6.725

4.  How does a simplified-sequence protein fold?

Authors:  Enrico Guarnera; Riccardo Pellarin; Amedeo Caflisch
Journal:  Biophys J       Date:  2009-09-16       Impact factor: 4.033

5.  Effects of protein size, thermodynamic stability, and net charge on cotranslational folding on the ribosome.

Authors:  José Arcadio Farías-Rico; Frida Ruud Selin; Ioanna Myronidi; Marie Frühauf; Gunnar von Heijne
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-17       Impact factor: 11.205

6.  Residue level quantification of protein stability in living cells.

Authors:  William B Monteith; Gary J Pielak
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-21       Impact factor: 11.205

7.  77Se NMR Probes the Protein Environment of Selenomethionine.

Authors:  Qingqing Chen; Shiping Xu; Xingyu Lu; Michael V Boeri; Yuliya Pepelyayeva; Elizabeth L Diaz; Sunil-Datta Soni; Marc Allaire; Martin B Forstner; Brian J Bahnson; Sharon Rozovsky
Journal:  J Phys Chem B       Date:  2020-01-07       Impact factor: 2.991

8.  The role of backbone conformational heat capacity in protein stability: temperature dependent dynamics of the B1 domain of Streptococcal protein G.

Authors:  M J Seewald; K Pichumani; C Stowell; B V Tibbals; L Regan; M J Stone
Journal:  Protein Sci       Date:  2000-06       Impact factor: 6.725

9.  Soluble mimics of a chemokine receptor: chemokine binding by receptor elements juxtaposed on a soluble scaffold.

Authors:  Amita Datta; Martin J Stone
Journal:  Protein Sci       Date:  2003-11       Impact factor: 6.725

10.  Trifluoroselenomethionine: A New Unnatural Amino Acid.

Authors:  Eric Block; Squire J Booker; Sonia Flores-Penalba; Graham N George; Sivaji Gundala; Bradley J Landgraf; Jun Liu; Stephene N Lodge; M Jake Pushie; Sharon Rozovsky; Abith Vattekkatte; Rama Yaghi; Huawei Zeng
Journal:  Chembiochem       Date:  2016-09-07       Impact factor: 3.164

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