Literature DB >> 8880932

A database of mutants and effects of site-directed mutagenesis experiments on G protein-coupled receptors.

K Kristiansen1, S G Dahl, O Edvardsen.   

Abstract

A database system and computer programs for storage and retrieval of information about guanine nucleotide-binding protein (G protein) -coupled receptor mutants and associated biological effects have been developed. Mutation data on the receptors were collected from the literature and a database of mutants and effects of mutations was developed. The G protein-coupled receptor, family A, point mutation database (GRAP) provides detailed information on ligand-binding and signal transduction properties of more than 2130 receptor mutants. The amino acid sequences of receptors for which mutation experiments have been reported were aligned, and from this alignment mutation data may be retrieved. Alternatively, a search form allowing detailed specification of which mutants to retrieve may be used, for example, to search for specific amino acid substitutions, substitutions in specific protein domains or reported biological effects. Furthermore, ligand and bibliographic oriented queries may be performed. GRAP is available on the Internet (URL: http://www-grap.fagmed.uit.no/GRAP/+ +homepage.html) using the World-Wide Web system.

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Year:  1996        PMID: 8880932     DOI: 10.1002/(SICI)1097-0134(199609)26:1<81::AID-PROT8>3.0.CO;2-J

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  11 in total

1.  Visualisation and integration of G protein-coupled receptor related information help the modelling: description and applications of the Viseur program.

Authors:  F Campagne; R Jestin; J L Reversat; J M Bernassau; B Maigret
Journal:  J Comput Aided Mol Des       Date:  1999-11       Impact factor: 3.686

2.  Olfactory receptor database: a sensory chemoreceptor resource.

Authors:  E Skoufos; L Marenco; P M Nadkarni; P L Miller; G M Shepherd
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

3.  Molecular modeling study of the differential ligand-receptor interaction at the mu, delta and kappa opioid receptors.

Authors:  M Filizola; M Carteni-Farina; J J Perez
Journal:  J Comput Aided Mol Des       Date:  1999-07       Impact factor: 3.686

4.  Modeling and docking the endothelin G-protein-coupled receptor.

Authors:  A J Orry; B A Wallace
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

5.  tGRAP, the G-protein coupled receptors mutant database.

Authors:  Oyvind Edvardsen; Anne Lise Reiersen; Margot W Beukers; Kurt Kristiansen
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

6.  A sequence and structural study of transmembrane helices.

Authors:  R P Bywater; D Thomas; G Vriend
Journal:  J Comput Aided Mol Des       Date:  2001-06       Impact factor: 3.686

7.  The variable and conserved interfaces of modeled olfactory receptor proteins.

Authors:  Y Pilpel; D Lancet
Journal:  Protein Sci       Date:  1999-05       Impact factor: 6.725

8.  GPCRDB: an information system for G protein-coupled receptors.

Authors:  F Horn; J Weare; M W Beukers; S Hörsch; A Bairoch; W Chen; O Edvardsen; F Campagne; G Vriend
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

9.  Third extracellular loop (EC3)-N terminus interaction is important for seven-transmembrane domain receptor function: implications for an activation microswitch region.

Authors:  Soumendra Rana; Thomas J Baranski
Journal:  J Biol Chem       Date:  2010-07-27       Impact factor: 5.157

10.  Virtual screening of GPCRs: an in silico chemogenomics approach.

Authors:  Laurent Jacob; Brice Hoffmann; Véronique Stoven; Jean-Philippe Vert
Journal:  BMC Bioinformatics       Date:  2008-09-06       Impact factor: 3.169

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