Literature DB >> 8855274

Active transposition in zebrafish.

W L Lam1, T S Lee, W Gilbert.   

Abstract

We have identified a new family of Tc1-like transposons in the zebrafish, Danio rerio. The sequence of a candidate active transposon, deduced from sample Tzf elements, shows limited resemblance to the previously described Tdr1 elements of zebrafish. Both the Tzf and the Tdr elements are extremely abundant in zebrafish. We describe here a general strategy for detecting transposition events in a complex genome and demonstrate its utility by selectively monitoring hundreds of potentially active Tzf copies in the zebrafish genome against a background of other related elements. We have followed members of a zebrafish pedigree, using this two-dimensional transposon display strategy, to identify the first examples of active transposition of such elements in vertebrates.

Entities:  

Mesh:

Substances:

Year:  1996        PMID: 8855274      PMCID: PMC38249          DOI: 10.1073/pnas.93.20.10870

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

Review 1.  Distribution of transposable elements in arthropods.

Authors:  H M Robertson; D J Lampe
Journal:  Annu Rev Entomol       Date:  1995       Impact factor: 19.686

Review 2.  Issues in searching molecular sequence databases.

Authors:  S F Altschul; M S Boguski; W Gish; J C Wootton
Journal:  Nat Genet       Date:  1994-02       Impact factor: 38.330

3.  The genetic data environment an expandable GUI for multiple sequence analysis.

Authors:  S W Smith; R Overbeek; C R Woese; W Gilbert; P M Gillevet
Journal:  Comput Appl Biosci       Date:  1994-12

4.  Large-scale genomic comparison using two-dimensional DNA gels.

Authors:  C L Sidman; D J Shaffer
Journal:  Genomics       Date:  1994-09-01       Impact factor: 5.736

5.  Large-scale mutagenesis in the zebrafish: in search of genes controlling development in a vertebrate.

Authors:  M C Mullins; M Hammerschmidt; P Haffter; C Nüsslein-Volhard
Journal:  Curr Biol       Date:  1994-03-01       Impact factor: 10.834

6.  Tc1 transposon-like sequences are widely distributed in salmonids.

Authors:  J L Goodier; W S Davidson
Journal:  J Mol Biol       Date:  1994-08-05       Impact factor: 5.469

7.  The mechanism of transposition of Tc3 in C. elegans.

Authors:  H G van Luenen; S D Colloms; R H Plasterk
Journal:  Cell       Date:  1994-10-21       Impact factor: 41.582

8.  Widespread occurrence of the Tc1 transposon family: Tc1-like transposons from teleost fish.

Authors:  A D Radice; B Bugaj; D H Fitch; S W Emmons
Journal:  Mol Gen Genet       Date:  1994-09-28

9.  The mariner transposable element is widespread in insects.

Authors:  H M Robertson
Journal:  Nature       Date:  1993-03-18       Impact factor: 49.962

10.  Mobilization of quiet, endogenous Tc3 transposons of Caenorhabditis elegans by forced expression of Tc3 transposase.

Authors:  H G van Luenen; S D Colloms; R H Plasterk
Journal:  EMBO J       Date:  1993-06       Impact factor: 11.598

View more
  14 in total

1.  Endogenous transposases affect differently Sleeping Beauty and Frog Prince transposons in fish cells.

Authors:  Jose Braulio Gallardo-Gálvez; Teresa Méndez; Julia Béjar; M Carmen Alvarez
Journal:  Mar Biotechnol (NY)       Date:  2010-12-01       Impact factor: 3.619

2.  General survey of hAT transposon superfamily with highlight on hobo element in Drosophila.

Authors:  Véronique Ladevèze; Nicole Chaminade; Françoise Lemeunier; Georges Periquet; Sylvie Aulard
Journal:  Genetica       Date:  2012-10-31       Impact factor: 1.082

3.  Transposition of the mariner element from Drosophila mauritiana in zebrafish.

Authors:  J M Fadool; D L Hartl; J E Dowling
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

4.  Detection of de novo insertion of the medaka fish transposable element Tol2.

Authors:  A Koga; H Hori
Journal:  Genetics       Date:  2000-11       Impact factor: 4.562

5.  Bacterial diversity and community structure in an aerated lagoon revealed by ribosomal intergenic spacer analyses and 16S ribosomal DNA sequencing.

Authors:  Z Yu; W W Mohn
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

6.  Mobile element scanning (ME-Scan) by targeted high-throughput sequencing.

Authors:  David J Witherspoon; Jinchuan Xing; Yuhua Zhang; W Scott Watkins; Mark A Batzer; Lynn B Jorde
Journal:  BMC Genomics       Date:  2010-06-30       Impact factor: 3.969

7.  The Tol1 transposable element of the medaka fish moves in human and mouse cells.

Authors:  Akihiko Koga; Atsuko Shimada; Toshiya Kuroki; Hiroshi Hori; Junko Kusumi; Yoriko Kyono-Hamaguchi; Satoshi Hamaguchi
Journal:  J Hum Genet       Date:  2007-06-07       Impact factor: 3.172

8.  The Frog Prince: a reconstructed transposon from Rana pipiens with high transpositional activity in vertebrate cells.

Authors:  Csaba Miskey; Zsuzsanna Izsvák; Ronald H Plasterk; Zoltán Ivics
Journal:  Nucleic Acids Res       Date:  2003-12-01       Impact factor: 16.971

9.  The zebrafish progranulin gene family and antisense transcripts.

Authors:  Benoît Cadieux; Babykumari P Chitramuthu; David Baranowski; Hugh P J Bennett
Journal:  BMC Genomics       Date:  2005-11-08       Impact factor: 3.969

Review 10.  Meganuclease and transposon mediated transgenesis in medaka.

Authors:  Clemens Grabher; Joachim Wittbrodt
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.