Literature DB >> 8846904

Centromere-linkage analysis and consolidation of the zebrafish genetic map.

S L Johnson1, M A Gates, M Johnson, W S Talbot, S Horne, K Baik, S Rude, J R Wong, J H Postlethwait.   

Abstract

The ease of isolating mutations in zebrafish will contribute to an understanding of a variety of processes common to all vertebrates. To facilitate genetic analysis of such mutations, we have identified DNA polymorphisms closely linked to each of the 25 centromeres of zebrafish, placed centromeres on the linkage map, increased the number of mapped PCR-based markers to 652, and consolidated the number of linkage groups to the number of chromosomes. This work makes possible centromere-linkage analysis, a novel, rapid method to assign mutations to a specific linkage group using half-tetrads.

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Year:  1996        PMID: 8846904      PMCID: PMC1207124     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  35 in total

1.  Identification of polymorphic simple sequence repeats in the genome of the zebrafish.

Authors:  D J Goff; K Galvin; H Katz; M Westerfield; E S Lander; C J Tabin
Journal:  Genomics       Date:  1992-09       Impact factor: 5.736

2.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

3.  Segregation analyses and gene-centromere distances in zebrafish.

Authors:  G Streisinger; F Singer; C Walker; D Knauber; N Dower
Journal:  Genetics       Date:  1986-02       Impact factor: 4.562

4.  Chromosomes of the zebra fish. A model for cytogenetic, embryologic, and ecologic study.

Authors:  A Endo; T H Ingalls
Journal:  J Hered       Date:  1968 Nov-Dec       Impact factor: 2.645

5.  Developmental biology. Catch of the decade.

Authors:  J P Concordet; P Ingham
Journal:  Nature       Date:  1994-05-05       Impact factor: 49.962

6.  Application of the ovarian teratoma mapping method in the mouse.

Authors:  J T Eppig; E M Eicher
Journal:  Genetics       Date:  1983-04       Impact factor: 4.562

7.  Microsatellite-centromere mapping in the zebrafish (Danio rerio).

Authors:  E J Kauffman; E E Gestl; D J Kim; C Walker; J M Hite; G Yan; P K Rogan; S L Johnson; K C Cheng
Journal:  Genomics       Date:  1995-11-20       Impact factor: 5.736

8.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736

Review 9.  Chicken genome mapping: a new era in avian genetics.

Authors:  D W Burt; N Bumstead; J J Bitgood; F A Ponce de Leon; L B Crittenden
Journal:  Trends Genet       Date:  1995-05       Impact factor: 11.639

10.  Structure of the zebrafish snail1 gene and its expression in wild-type, spadetail and no tail mutant embryos.

Authors:  C Thisse; B Thisse; T F Schilling; J H Postlethwait
Journal:  Development       Date:  1993-12       Impact factor: 6.868

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  44 in total

1.  Radiation hybrid mapping of the zebrafish genome.

Authors:  N A Hukriede; L Joly; M Tsang; J Miles; P Tellis; J A Epstein; W B Barbazuk; F N Li; B Paw; J H Postlethwait; T J Hudson; L I Zon; J D McPherson; M Chevrette; I B Dawid; S L Johnson; M Ekker
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

2.  Assessment of polymorphism in zebrafish mapping strains.

Authors:  A Nechiporuk; J E Finney; M T Keating; S L Johnson
Journal:  Genome Res       Date:  1999-12       Impact factor: 9.043

3.  Gene mapping in fishes: a means to an end.

Authors:  R G Danzmann; K Gharbi
Journal:  Genetica       Date:  2001       Impact factor: 1.082

4.  Coupled mutagenesis screens and genetic mapping in zebrafish.

Authors:  John F Rawls; Matthew R Frieda; Anthony R McAdow; Jason P Gross; Chad M Clayton; Candy K Heyen; Stephen L Johnson
Journal:  Genetics       Date:  2003-03       Impact factor: 4.562

5.  Genetic positioning of centromeres using half-tetrad analysis in a 4x-2x cross population of potato.

Authors:  Tae-Ho Park; Jong-Bo Kim; Ronald C B Hutten; Herman J van Eck; Evert Jacobsen; Richard G F Visser
Journal:  Genetics       Date:  2007-03-04       Impact factor: 4.562

6.  Genetic positioning of centromeres through half-tetrad analysis in gynogenetic diploid families of the Zhikong scallop (Chlamys farreri).

Authors:  Hongtao Nie; Qi Li; Xuelin Zhao; Lingfeng Kong
Journal:  Mar Biotechnol (NY)       Date:  2012-04-27       Impact factor: 3.619

7.  Pollen markers for gene-centromere mapping in diploid potato.

Authors:  H J Bastiaanssen; M S Ramanna; Z Sawor; A Mincione; A V Steen; E Jacobsen
Journal:  Theor Appl Genet       Date:  1996-11       Impact factor: 5.699

8.  Regulation of neurocoel morphogenesis by Pard6 gamma b.

Authors:  Chantilly Munson; Jan Huisken; Nana Bit-Avragim; Taiyi Kuo; P D Dong; Elke A Ober; Heather Verkade; Salim Abdelilah-Seyfried; Didier Y R Stainier
Journal:  Dev Biol       Date:  2008-09-09       Impact factor: 3.582

9.  Essential role for fibrillin-2 in zebrafish notochord and vascular morphogenesis.

Authors:  John M Gansner; Erik C Madsen; Robert P Mecham; Jonathan D Gitlin
Journal:  Dev Dyn       Date:  2008-10       Impact factor: 3.780

10.  Rapid gynogenetic mapping of Xenopus tropicalis mutations to chromosomes.

Authors:  Mustafa K Khokha; Vladimir Krylov; Michael J Reilly; Joseph G Gall; Dipankan Bhattacharya; Chung Yan J Cheung; Sarah Kaufman; Dang Khoa Lam; Jaroslav Macha; Catherine Ngo; Neha Prakash; Philip Schmidt; Tereza Tlapakova; Toral Trivedi; Lucie Tumova; Anita Abu-Daya; Timothy Geach; Elisenda Vendrell; Holly Ironfield; Ludivine Sinzelle; Amy K Sater; Dan E Wells; Richard M Harland; Lyle B Zimmerman
Journal:  Dev Dyn       Date:  2009-06       Impact factor: 3.780

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