Literature DB >> 8837439

The NAD(P)H-dependent glutamate dehydrogenase activities of Prevotella ruminicola B(1)4 can be attributed to one enzyme (GdhA), and gdhA expression is regulated in response to the nitrogen source available for growth.

Z Wen1, M Morrison.   

Abstract

Prevotella ruminicola B(1)4 possesses both NADPH- and NADH-linked glutamate dehydrogenase (GDH) activities, with the greatest specific activity being measured from ammonia-limited cultures. Relative to cells grown in the presence of 1 mM ammonium chloride, the NADPH-dependent activity was decreased approximately 10-fold when peptides were provided as a nitrogen source. Nondenaturing polyacrylamide gel electrophoresis (PAGE) was used to visualize the GDH protein(s) in cell extracts of P. ruminicola. For all growth conditions tested, only one GDH protein was detectable, and its relative abundance, as well as its reactivity with either NAD(P)+ or NAD(P)H, correlated well with the specific activities measured from whole-cell assays. Consistent with the findings from enzyme assays and PAGE activity gels, Northern (RNA) blot analysis revealed that expression of a gene encoding NAD(P)H-GDH activity was greatest in ammonia-grown cultures and that GDH activity is regulated in response to nitrogen source (ammonia versus peptides), probably at the level of transcription. A gene encoding the NAD(P)H-utilizing GDH activity (gdhA) was cloned, and its nucleotide sequence was determined and shown to contain an open reading frame of 1,332 bp which would encode a polypeptide of 48.8 kDa. The deduced amino acid sequence possesses three highly conserved motifs typical of family I GDHs, but several unique amino acid substitutions within these motifs were evident. These results are discussed within the context of ruminal nitrogen metabolism and the growth efficiency of succinate- and propionate-producing anaerobic bacteria.

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Year:  1996        PMID: 8837439      PMCID: PMC168191          DOI: 10.1128/aem.62.10.3826-3833.1996

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  28 in total

1.  Fermentation of Peptides by Bacteroides ruminicola B(1)4.

Authors:  J B Russell
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3.  Ammonia assimilation and glutamate formation in the anaerobe Selenomonas ruminantium.

Authors:  C J Smith; R B Hespell; M P Bryant
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4.  'Glutamine(amide):2-oxoglutarate amino transferase oxido-reductase (NADP); an enzyme involved in the synthesis of glutamate by some bacteria.

Authors:  J L Meers; D W Tempest; C M Brown
Journal:  J Gen Microbiol       Date:  1970-12

5.  Identification of amino acids modified by the bifunctional affinity label 5'-(p-(fluorosulfonyl)benzoyl)-8-azidoadenosine in the reduced coenzyme regulatory site of bovine liver glutamate dehydrogenase.

Authors:  K E Dombrowski; Y C Huang; R F Colman
Journal:  Biochemistry       Date:  1992-04-21       Impact factor: 3.162

6.  Glucose toxicity in Prevotella ruminicola: methylglyoxal accumulation and its effect on membrane physiology.

Authors:  J B Russell
Journal:  Appl Environ Microbiol       Date:  1993-09       Impact factor: 4.792

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Journal:  J Bacteriol       Date:  1985-10       Impact factor: 3.490

8.  PEPTIDES AND OTHER NITROGEN SOURCES FOR GROWTH OF BACTEROIDES RUMINICOLA.

Authors:  K A PITTMAN; M P BRYANT
Journal:  J Bacteriol       Date:  1964-08       Impact factor: 3.490

9.  Genetic diversity and phylogenetic relationships among strains of Prevotella (Bacteroides) ruminicola from the rumen.

Authors:  G Avgustin; F Wright; H J Flint
Journal:  Int J Syst Bacteriol       Date:  1994-04

10.  Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold.

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Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  10 in total

1.  Glutamate dehydrogenase activity profiles for type strains of ruminal Prevotella spp.

Authors:  Z Wen; M Morrison
Journal:  Appl Environ Microbiol       Date:  1997-08       Impact factor: 4.792

2.  Cloning and characterization of the gene encoding the glutamate dehydrogenase of Streptococcus suis serotype 2.

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3.  Nitrogen utilization and metabolism in Ruminococcus albus 8.

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4.  Transcriptional regulation of beta-glucanase activity in the ruminal bacterium, Prevotella bryantii B14.

Authors:  Matthew W Fields; James B Russell
Journal:  Curr Microbiol       Date:  2005-03-15       Impact factor: 2.188

5.  Ribosomal RNA genes from Prevotella bryantii: organization and heterogeneity.

Authors:  M Peterka; G Avgustin
Journal:  Folia Microbiol (Praha)       Date:  2001       Impact factor: 2.099

6.  The NAD(P)H-utilizing glutamate dehydrogenase of Bacteroides thetaiotaomicron belongs to enzyme family I, and its activity is affected by trans-acting gene(s) positioned downstream of gdhA.

Authors:  L Baggio; M Morrison
Journal:  J Bacteriol       Date:  1996-12       Impact factor: 3.490

7.  Probabilistic annotation of protein sequences based on functional classifications.

Authors:  Emmanuel D Levy; Christos A Ouzounis; Walter R Gilks; Benjamin Audit
Journal:  BMC Bioinformatics       Date:  2005-12-14       Impact factor: 3.169

8.  Phylum level change in the cecal and fecal gut communities of rats fed diets containing different fermentable substrates supports a role for nitrogen as a factor contributing to community structure.

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Journal:  Nutrients       Date:  2015-05-06       Impact factor: 5.717

9.  Metabolic networks for nitrogen utilization in Prevotella ruminicola 23.

Authors:  Jong Nam Kim; Celia Méndez-García; Renae R Geier; Michael Iakiviak; Jongsoo Chang; Isaac Cann; Roderick I Mackie
Journal:  Sci Rep       Date:  2017-08-10       Impact factor: 4.379

10.  Sex differences in gut fermentation and immune parameters in rats fed an oligofructose-supplemented diet.

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  10 in total

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