Literature DB >> 8787414

A marine oligobacterium harboring genes known to be part of aromatic hydrocarbon degradation pathways of soil pseudomonads.

Y Wang1, P C Lau, D K Button.   

Abstract

The far-ranging distribution of genes for aromatic hydrocarbon catabolism, predominantly studied in soil pseudomonads, is extended to a marine oligobacterium by finding five homologous sequences in a 5.7-kb chromosomal DNA from a new isolate, Cycloclasticus oligotrophus RB1. RB1 is capable of growth in unamended seawater or mineral salts media supplemented with a variety of aromatic compounds, including toluene, o-, m-, or p-xylenes, as sole carbon sources. The five open reading frames, designated xylM, K, G, C1, and C2, are 57% A+T-rich. XylM is predicted to be an integral membrane protein; XylK and XylG possess glutathione S-transferase (GST) and 2-hydroxy-5methyl-6-oxohexa2,4-dienoate dehydrogenase activities, respectively; XylC1C2 are homologs of the large and small subunits of the iron sulfur protein component of the biphenyl dioxygenase (e.g., BphA1A2).

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Year:  1996        PMID: 8787414      PMCID: PMC167995          DOI: 10.1128/aem.62.6.2169-2173.1996

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  19 in total

1.  Analysis of bph operon from the polychlorinated biphenyl-degrading strain of Pseudomonas pseudoalcaligenes KF707.

Authors:  K Taira; J Hirose; S Hayashida; K Furukawa
Journal:  J Biol Chem       Date:  1992-03-05       Impact factor: 5.157

2.  Isolation of Typical Marine Bacteria by Dilution Culture: Growth, Maintenance, and Characteristics of Isolates under Laboratory Conditions.

Authors:  F Schut; E J de Vries; J C Gottschal; B R Robertson; W Harder; R A Prins; D K Button
Journal:  Appl Environ Microbiol       Date:  1993-07       Impact factor: 4.792

3.  Nucleotide sequences of the meta-cleavage pathway enzymes 2-hydroxymuconic semialdehyde dehydrogenase and 2-hydroxymuconic semialdehyde hydrolase from Pseudomonas CF600.

Authors:  I Nordlund; V Shingler
Journal:  Biochim Biophys Acta       Date:  1990-06-21

4.  Glutathione S-transferases. The first enzymatic step in mercapturic acid formation.

Authors:  W H Habig; M J Pabst; W B Jakoby
Journal:  J Biol Chem       Date:  1974-11-25       Impact factor: 5.157

Review 5.  The evolution of pathways for aromatic hydrocarbon oxidation in Pseudomonas.

Authors:  P A Williams; J R Sayers
Journal:  Biodegradation       Date:  1994-12       Impact factor: 3.909

6.  Sequence and expression of the bpdC1C2BADE genes involved in the initial steps of biphenyl/chlorobiphenyl degradation by Rhodococcus sp. M5.

Authors:  Y Wang; J Garnon; D Labbé; H Bergeron; P C Lau
Journal:  Gene       Date:  1995-10-16       Impact factor: 3.688

7.  Theta, a new class of glutathione transferases purified from rat and man.

Authors:  D J Meyer; B Coles; S E Pemble; K S Gilmore; G M Fraser; B Ketterer
Journal:  Biochem J       Date:  1991-03-01       Impact factor: 3.857

8.  Isolation and characterization of a fluoranthene-utilizing strain of Pseudomonas paucimobilis.

Authors:  J G Mueller; P J Chapman; B O Blattmann; P H Pritchard
Journal:  Appl Environ Microbiol       Date:  1990-04       Impact factor: 4.792

9.  The biphenyl/polychlorinated biphenyl-degradation locus (bph) of Pseudomonas sp. LB400 encodes four additional metabolic enzymes.

Authors:  B Hofer; S Backhaus; K N Timmis
Journal:  Gene       Date:  1994-06-24       Impact factor: 3.688

Review 10.  Molecular analysis of pentachlorophenol degradation.

Authors:  C S Orser; C C Lange
Journal:  Biodegradation       Date:  1994-12       Impact factor: 3.909

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  22 in total

1.  Sphingomonas alaskensis strain AFO1, an abundant oligotrophic ultramicrobacterium from the North Pacific.

Authors:  M Eguchi; M Ostrowski; F Fegatella; J Bowman; D Nichols; T Nishino; R Cavicchioli
Journal:  Appl Environ Microbiol       Date:  2001-11       Impact factor: 4.792

2.  High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates.

Authors:  Stephanie A Connon; Stephen J Giovannoni
Journal:  Appl Environ Microbiol       Date:  2002-08       Impact factor: 4.792

3.  Complete sequence of a 184-kilobase catabolic plasmid from Sphingomonas aromaticivorans F199.

Authors:  M F Romine; L C Stillwell; K K Wong; S J Thurston; E C Sisk; C Sensen; T Gaasterland; J K Fredrickson; J D Saffer
Journal:  J Bacteriol       Date:  1999-03       Impact factor: 3.490

4.  Glutathione S-transferase-encoding gene as a potential probe for environmental bacterial isolates capable of degrading polycyclic aromatic hydrocarbons.

Authors:  G Lloyd-Jones; P C Lau
Journal:  Appl Environ Microbiol       Date:  1997-08       Impact factor: 4.792

5.  A small, dilute-cytoplasm, high-affinity, novel bacterium isolated by extinction culture and having kinetic constants compatible with growth at ambient concentrations of dissolved nutrients in seawater.

Authors:  D K Button; B R Robertson; P W Lepp; T M Schmidt
Journal:  Appl Environ Microbiol       Date:  1998-11       Impact factor: 4.792

Review 6.  Bacterial glutathione S-transferases: what are they good for?

Authors:  S Vuilleumier
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

7.  Purification, characterization, and sequence analysis of 2-aminomuconic 6-semialdehyde dehydrogenase from Pseudomonas pseudoalcaligenes JS45.

Authors:  Z He; J K Davis; J C Spain
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

Review 8.  Marine Oil-Degrading Microorganisms and Biodegradation Process of Petroleum Hydrocarbon in Marine Environments: A Review.

Authors:  Jianliang Xue; Yang Yu; Yu Bai; Liping Wang; Yanan Wu
Journal:  Curr Microbiol       Date:  2015-04-28       Impact factor: 2.188

9.  Molecular cloning, expression and site-directed mutagenesis of glutathione S-transferase from Ochrobactrum anthropi.

Authors:  B Favaloro; A Tamburro; S Angelucci; A D Luca; S Melino; C di Ilio; D Rotilio
Journal:  Biochem J       Date:  1998-11-01       Impact factor: 3.857

10.  Isolation, gene detection and solvent tolerance of benzene, toluene and xylene degrading bacteria from nearshore surface water and Pacific Ocean sediment.

Authors:  Lin Wang; Nan Qiao; Fengqin Sun; Zongze Shao
Journal:  Extremophiles       Date:  2008-02-20       Impact factor: 2.395

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