Literature DB >> 8786094

Integration of the cytogenetic, genetic, and physical maps of the human genome by FISH mapping of CEPH YAC clones.

P Bray-Ward1, J Menninger, J Lieman, T Desai, N Mokady, A Banks, D C Ward.   

Abstract

The physical locations on human metaphase chromosomes of over 950 yeast artificial chromosome (YAC) clones from the CEPH library have been determined by fluorescence in situ hybridization and described as fractional chromosome length relative to the terminus of the short arm. Collectively, these clones contain approximately 1 billion basepairs of human DNA, about one-third of the human genome. In addition, the locations of 337 of these clones were established in terms of cytogenetic bands for chromosomes 1-18, 20, and X. Since most clones are positive for one or more of the Généthon polymorphic STS markers with defined genetic linkage distances corresponding to their physical locations, these data facilitate the integration of the cytogenetic, genetic, and physical maps of the human genome. Use of these mapping data in conjunction with public database information on CEPH YACs greatly facilitates the identification of YACs or polymorphic markers at specific locations in the genome.

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Year:  1996        PMID: 8786094     DOI: 10.1006/geno.1996.0070

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  22 in total

1.  Evolutionary relationships among Rel domains indicate functional diversification by recombination.

Authors:  I A Graef; J M Gastier; U Francke; G R Crabtree
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-08       Impact factor: 11.205

2.  Sequence-based design of single-copy genomic DNA probes for fluorescence in situ hybridization.

Authors:  P K Rogan; P M Cazcarro; J H Knoll
Journal:  Genome Res       Date:  2001-06       Impact factor: 9.043

3.  Systematic characterisation of disease associated balanced chromosome rearrangements by FISH: cytogenetically and genetically anchored YACs identify microdeletions and candidate regions for mental retardation genes.

Authors:  J Wirth; H G Nothwang; S van der Maarel; C Menzel; G Borck; I Lopez-Pajares; K Brøndum-Nielsen; N Tommerup; M Bugge; H H Ropers; T Haaf
Journal:  J Med Genet       Date:  1999-04       Impact factor: 6.318

4.  The gene for the ataxia-telangiectasia variant, Nijmegen breakage syndrome, maps to a 1-cM interval on chromosome 8q21.

Authors:  K Saar; K H Chrzanowska; M Stumm; M Jung; G Nürnberg; T F Wienker; E Seemanová; R D Wegner; A Reis; K Sperling
Journal:  Am J Hum Genet       Date:  1997-03       Impact factor: 11.025

Review 5.  "KARIBIN," an information resource for obtaining genomic information in a cytogenetic band.

Authors:  J Zhang; G Shen-Ong; J Ostell
Journal:  Genome Res       Date:  1999-01       Impact factor: 9.043

6.  46,XX, inv(6)(p21.1p23) in a pedigree with hereditary haemochromatosis.

Authors:  C P Venditti; N K Seese; G S Gerhard; A E Ten Elshof; K A Chorney; P N Mowrey; P G Lacey; J H Knoll; M J Chorney
Journal:  J Med Genet       Date:  1997-01       Impact factor: 6.318

7.  Region-specific YAC banding and painting probes for comparative genome mapping: implications for the evolution of human chromosome 2.

Authors:  T Haaf; P Bray-Ward
Journal:  Chromosoma       Date:  1996-06       Impact factor: 4.316

8.  Studies on locus content mapping.

Authors:  J W Teague; A Collins; N E Morton
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-15       Impact factor: 11.205

9.  Construction of a swine YAC library allowing an efficient recovery of unique and centromeric repeated sequences.

Authors:  C Rogel-Gaillard; N Bourgeaux; J C Save; C Renard; P Coullin; P Pinton; M Yerle; M Vaiman; P Chardon
Journal:  Mamm Genome       Date:  1997-03       Impact factor: 2.957

10.  Cosmid-derived markers anchoring the bovine genetic map to the physical map.

Authors:  L Ferretti; B G Urquhart; A Eggen; I Olsaker; B Harlizius; B Castiglioni; A Mezzelani; S Solinas Toldo; U Thieven; Y Zhang; A L Morgan; V M Teres; M Schwerin; I Martin-Burriel; B P Chowdhary; G Erhardt; I J Nijman; E P Cribiu; W Barendse; H Leveziel; R Fries; J L Williams
Journal:  Mamm Genome       Date:  1997-01       Impact factor: 2.957

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