Literature DB >> 9021144

Cosmid-derived markers anchoring the bovine genetic map to the physical map.

L Ferretti1, B G Urquhart, A Eggen, I Olsaker, B Harlizius, B Castiglioni, A Mezzelani, S Solinas Toldo, U Thieven, Y Zhang, A L Morgan, V M Teres, M Schwerin, I Martin-Burriel, B P Chowdhary, G Erhardt, I J Nijman, E P Cribiu, W Barendse, H Leveziel, R Fries, J L Williams.   

Abstract

The mapping strategy for the bovine genome described in this paper uses large insert clones as a tool for physical mapping and as a source of highly polymorphic microsatellites for genetic typing, and was one objective of the BovMap Project funded by the European Union (UE). Eight-three cosmid and phage clones were characterized and used to physically anchor the linkage groups defining all the bovine autosomes and the X Chromosome (Chr). By combining physical and genetic mapping, clones described in this paper have led to the identification of the linkage groups corresponding to Chr 9, 12, 16, and 25. In addition, anchored loci from this study were used to orient the linkage groups corresponding to Chr 3, 7, 8, 9, 13, 16, 18, 19, and 28 as identified in previously published maps. Comparison of the estimated size of the physical and linkage maps suggests that the genetic length of the bovine genome may be around 4000 cM.

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Year:  1997        PMID: 9021144     DOI: 10.1007/s003359900341

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  53 in total

1.  High-resolution mapping of human chromosome 11 by in situ hybridization with cosmid clones.

Authors:  P Lichter; C J Tang; K Call; G Hermanson; G A Evans; D Housman; D C Ward
Journal:  Science       Date:  1990-01-05       Impact factor: 47.728

2.  Mapping of a linkage group to the last bovine chromosome (BTA27) without an assignment.

Authors:  J Masabanda; S M Kappes; T P Smith; C W Beattie; R Fries
Journal:  Mamm Genome       Date:  1996-03       Impact factor: 2.957

3.  A polymorphic bovine dinucleotide repeat DXYS4 (IOZARA 1489) at the pseudo-autosomal region of the sex chromosomes.

Authors:  I Martín-Burriel; B P Chowdhary; B Prakash; P Zaragoza; I Olsaker
Journal:  Anim Genet       Date:  1996-08       Impact factor: 3.169

4.  A highly polymorphic bovine dinucleotide repeat D19S4 (IOBT 34) at chromosome 19q21.

Authors:  I Olsaker; S Solinas-Toldo; R Fries
Journal:  Anim Genet       Date:  1996-02       Impact factor: 3.169

5.  An autosomal genetic linkage map of the sheep genome.

Authors:  A M Crawford; K G Dodds; A J Ede; C A Pierson; G W Montgomery; H G Garmonsway; A E Beattie; K Davies; J F Maddox; S W Kappes
Journal:  Genetics       Date:  1995-06       Impact factor: 4.562

6.  An STS-based map of the human genome.

Authors:  T J Hudson; L D Stein; S S Gerety; J Ma; A B Castle; J Silva; D K Slonim; R Baptista; L Kruglyak; S H Xu; X Hu; A M Colbert; C Rosenberg; M P Reeve-Daly; S Rozen; L Hui; X Wu; C Vestergaard; K M Wilson; J S Bae; S Maitra; S Ganiatsas; C A Evans; M M DeAngelis; K A Ingalls; R W Nahf; L T Horton; M O Anderson; A J Collymore; W Ye; V Kouyoumjian; I S Zemsteva; J Tam; R Devine; D F Courtney; M T Renaud; H Nguyen; T J O'Connor; C Fizames; S Fauré; G Gyapay; C Dib; J Morissette; J B Orlin; B W Birren; N Goodman; J Weissenbach; T L Hawkins; S Foote; D C Page; E S Lander
Journal:  Science       Date:  1995-12-22       Impact factor: 47.728

7.  An autosomal genetic linkage map of the chicken.

Authors:  I Levin; L Santangelo; H Cheng; L B Crittenden; J B Dodgson
Journal:  J Hered       Date:  1994 Mar-Apr       Impact factor: 2.645

8.  Mapping of the beta-lactoglobulin gene and of an immunoglobulin M heavy chain-like sequence to homoeologous cattle, sheep, and goat chromosomes.

Authors:  H C Hayes; E J Petit
Journal:  Mamm Genome       Date:  1993       Impact factor: 2.957

9.  Mapping of new bovine microsatellites on cattle chromosome 15 with somatic cell hybrids, linkage analysis, and fluorescence in situ hybridization.

Authors:  D Vaiman; I Bahri-Darwich; D Mercier; M Yerle; A Eggen; H Leveziel; G Guérin; J Gellin; E P Cribiu
Journal:  Mamm Genome       Date:  1993-11       Impact factor: 2.957

10.  Chromosomal localization and molecular characterization of 53 cosmid-derived bovine microsatellites.

Authors:  A Mezzelani; Y Zhang; L Redaelli; B Castiglioni; P Leone; J L Williams; S S Toldo; G Wigger; R Fries; L Ferretti
Journal:  Mamm Genome       Date:  1995-09       Impact factor: 2.957

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  8 in total

1.  Correlation between genetic and cytogenetic maps of the rat.

Authors:  Y Andoh; T Kuramoto; N Yokoi; T Maihara; K Kitada; T Serikawa
Journal:  Mamm Genome       Date:  1998-04       Impact factor: 2.957

2.  The amelogenin loci span an ancient pseudoautosomal boundary in diverse mammalian species.

Authors:  Mineyo Iwase; Yoko Satta; Yuriko Hirai; Hirohisa Hirai; Hirotami Imai; Naoyuki Takahata
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-02       Impact factor: 11.205

3.  Isolation of coding sequences from bovine cosmids by means of exon trapping.

Authors:  S Comincini; B Drisaldi; L Ferretti
Journal:  Mamm Genome       Date:  1997-07       Impact factor: 2.957

4.  Six bovine cosmid-derived microsatellites mapping different syntenic groups are fluorescence in situ hybridization mapped to six river buffalo chromosomes.

Authors:  L Iannuzzi; G P Di Meo; L Ferretti
Journal:  Chromosome Res       Date:  1997-12       Impact factor: 5.239

5.  A medium-density genetic linkage map of the bovine genome.

Authors:  W Barendse; D Vaiman; S J Kemp; Y Sugimoto; S M Armitage; J L Williams; H S Sun; A Eggen; M Agaba; S A Aleyasin; M Band; M D Bishop; J Buitkamp; K Byrne; F Collins; L Cooper; W Coppettiers; B Denys; R D Drinkwater; K Easterday; C Elduque; S Ennis; G Erhardt; L Li; L Lil
Journal:  Mamm Genome       Date:  1997-01       Impact factor: 2.957

6.  A second-generation linkage map of the sheep genome.

Authors:  M J de Gortari; B A Freking; R P Cuthbertson; S M Kappes; J W Keele; R T Stone; K A Leymaster; K G Dodds; A M Crawford; C W Beattie
Journal:  Mamm Genome       Date:  1998-03       Impact factor: 2.957

7.  New markers on bovine chromosome 1 are closely linked to the polled gene in Simmental and Pinzgauer cattle.

Authors:  B Harlizius; I Tammen; K Eichler; A Eggen; D J Hetzel
Journal:  Mamm Genome       Date:  1997-04       Impact factor: 2.957

8.  First-generation linkage map of the gray, short-tailed opossum, Monodelphis domestica, reveals genome-wide reduction in female recombination rates.

Authors:  Paul B Samollow; Candace M Kammerer; Susan M Mahaney; Jennifer L Schneider; Scott J Westenberger; John L VandeBerg; Edward S Robinson
Journal:  Genetics       Date:  2004-01       Impact factor: 4.562

  8 in total

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